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WormBase Tree Display for Gene: WBGene00042899

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Name Class

WBGene00042899SMapS_parentSequencecb25.NA_253
IdentityVersion2
NameCGC_nameCbr-acr-21.1From_analysisInferred_from_orthology
Sequence_nameCBG24892
Molecular_nameCBG24892
CBG24892.1
CBP47385
Other_nameCBG_24892Accession_evidenceNDBHE601121
Public_nameCbr-acr-21.1
DB_infoDatabaseNDBlocus_tagCBG_24892
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-acr-21.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
RNASeq_FPKMWBls:00000020.487213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.782327From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.916253From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.943516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.554818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.72545From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.735536From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.081056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.262324From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.443591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.174883From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.244323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0.29682From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.349316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.056126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.222707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.238163From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.318344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.066723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.237887From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.567867From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.39899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.818438From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.99077From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.25948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.13636From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.179052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.844893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.850862From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.856831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.962017From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.96729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.105848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.155795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.161959From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.168122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.565999From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.83423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.815076From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.876458From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.46203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.53272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.251306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.287418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.324801From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.366732From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.405569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.564568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.257502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.306109From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.348527From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.443591From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.808603From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.42458From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.792453From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145837
00145838
00145839
00145840
00145841
00145842
00145843
00145844
Ortholog (27)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-21.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24892
Corresponding_CDS_historyCBG24892:bp194
CBG24892:bp256
Corresponding_transcriptCBG24892.1
Other_sequenceAS17838
ASC25431_1
JI182272.1
Experimental_infoExpr_patternExpr1057291
Microarray_resultsGPL8303_CB6_WBGene00042899_A
GPL8303_CB6_WBGene00042899_B
GPL14143_CBG15209_707-766_0.881_42_B
GPL14143_CBG15209_789-848_0.745_191_C
GPL14143_CBG15209_949-1008_0.878_48_A
MethodGene