WormBase Tree Display for Gene: WBGene00040593

WBGene00040593 SMap: S_parent: Sequence: cb25.fpc4292a
  Identity: Version: 3
    Name: CGC_name: Cbr-glr-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG21924
      Molecular_name: CBG21924
        CBG21924.1
        CBP39215
      Other_name: CBG_21924 Accession_evidence: NDB HE600952
      Public_name: Cbr-glr-3
    DB_info: Database: NDB locus_tag CBG_21924
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:10 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-glr-3
        3 31 Aug 2016 10:30:13 WBPerson4025 Event: Split_into: WBGene00270363
      Split_into: WBGene00270363
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: glr
    RNASeq_FPKM: WBls:0000002 0.37748 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.729448 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.830276 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.3839 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.297694 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.553464 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.697131 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.39405 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.612683 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.831316 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.690849 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.847181 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 1.42606 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        1.81008 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        2.19409 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        1.12096 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        1.59645 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        1.62124 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        1.76866 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 0.107514 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.135569 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.460448 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.13826 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.584634 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.603761 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.0337 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.613952 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.06936 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.340776 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.436267 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.496399 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.652021 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.682911 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.073982 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.07934 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.166711 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.172874 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.254083 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.28409 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.225197 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.269087 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.328327 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.331357 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.052183 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.055949 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.204968 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.027975 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.08416 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.244042 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.37748 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.536718 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.385765 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.608768 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00144005
      00144006
      00144007
      00144008
      00144009
    Ortholog (33)
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable ionotropic glutamate receptor activity. Predicted to be involved in monoatomic ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans glr-3. In C. elegans, glr-3 is involved in detection of cold stimulus involved in thermoception and detection of temperature stimulus involved in sensory perception of pain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG21924
    Corresponding_CDS_history: CBG21924:bp194
      CBG21924:bp255
    Corresponding_transcript: CBG21924.1
    Other_sequence: Acan_isotig13320
      AS01537
      JI175081.1
      ASC24720_1
      JO468630.1
      JI237114.1
      Oden_isotig27467
  Experimental_info: Expr_pattern: Expr1052543
    Microarray_results: GPL14143_CBG21924_1011-1070_0.778_36_A
  Method: Gene