WormBase Tree Display for Gene: WBGene00040472

WBGene00040472 SMap: S_parent: Sequence: cb25.fpc4260b
  Identity: Version: 2
    Name: CGC_name: Cbr-rpb-12 From_analysis: Inferred_from_orthology
      Sequence_name: CBG21781
      Molecular_name: CBG21781
        CBG21781.1
        CBP05125
      Other_name: CBG_21781 Accession_evidence: NDB HE600966
      Public_name: Cbr-rpb-12
    DB_info: Database: NDB locus_tag CBG_21781
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:10 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 08 Oct 2007 14:19:24 WBPerson2970 Name_change: CGC_name: Cbr-rpb-12
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpb
    RNASeq_FPKM: WBls:0000002 4.583 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        5.5467 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        5.72203 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        7.03639 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        5.76265 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.78617 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        5.9786 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 10.2686 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        11.8523 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        13.4359 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        10.9417 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        9.12046 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 10.2249 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        12.7348 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        7.71492 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        11.2706 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        11.5378 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        16.9856 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        7.38015 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.858591 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.92317 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        2.51939 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.7764 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.43679 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.87714 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.95041 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 3.4899 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.08561 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        3.78081 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        4.39383 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        4.58265 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        4.77147 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        4.87234 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 3.87775 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        3.87963 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        4.01721 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        4.04253 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.15478 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        4.25796 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        4.20637 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        4.49792 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.74002 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        6.07739 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 3.18601 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        5.1998 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        5.38209 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        5.7477 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        6.54531 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        8.42531 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        4.79917 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        5.29095 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        5.58961 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 5.1998 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.47706 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        5.43147 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.03695 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00143889
      00143890
      00143891
      00143892
    Ortholog: WBGene00009078 Caenorhabditis elegans From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
      WBGene00063906 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      FL83_16557 Caenorhabditis latens From_analysis: WormBase-Compara
      WBGene00223795 Brugia malayi From_analysis: WormBase-Compara
      WBGene00240105 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity; DNA-directed 5'-3' RNA polymerase activity; and zinc ion binding activity. Predicted to be involved in DNA-templated transcription. Is an ortholog of C. elegans rpb-12. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG21781
    Corresponding_CDS_history: CBG21781:bp194
    Corresponding_transcript: CBG21781.1
    Other_sequence (80)
  Experimental_info: Expr_pattern: Expr1066394
      Expr1069162
      Expr1069429
    Microarray_results (11)
  Method: Gene