WormBase Tree Display for Gene: WBGene00039066

WBGene00039066 SMap: S_parent: Sequence: cb25.fpc4152
  Identity: Version: 2
    Name: CGC_name: Cbr-pepm-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG19949
      Molecular_name: CBG19949
        CBG19949.1
        CBP31507
      Other_name: CBG_19949 Accession_evidence: NDB HE601481
      Public_name: Cbr-pepm-1.1
    DB_info: Database: NDB locus_tag CBG_19949
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:08 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbr-pepm-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pepm
    RNASeq_FPKM: WBls:0000002 3.60779 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        4.64646 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        5.74716 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        8.98722 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        3.92442 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        4.28544 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.29147 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.030891 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.061783 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.020594 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.095509 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.191019 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.103677 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.119907 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.20746 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 0.16014 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.57049 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.55133 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.855735 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        1.88357 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.82283 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 5.48686 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.413405 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        3.87689 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        4.40075 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        4.7763 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        5.6757 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        7.637 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 4.43711 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        5.19584 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        5.42119 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.57561 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        5.95538 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        6.09644 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        6.02591 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        6.2191 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        6.31656 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        9.99548 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.775035 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.88309 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.56201 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        2.05931 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2.46267 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        7.03391 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        1.81066 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        3.471 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        8.51262 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 3.53344 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        3.79244 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.61241 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        3.83467 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    Ortholog (21)
    Paralog: WBGene00027273 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Aminopeptidase N-like , N-terminal domain superfamliy and Peptidase M1 N-terminal domain. Is an ortholog of C. elegans pepm-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG19949
    Corresponding_CDS_history: CBG19949:bp194
    Corresponding_transcript: CBG19949.1
  Experimental_info: Expr_pattern: Expr1051764
    Microarray_results: GPL8303_CB6_WBGene00039066_A
      GPL14143_CBG04636_420-479_0.943_3_A
  Method: Gene