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WormBase Tree Display for Gene: WBGene00038595

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Name Class

WBGene00038595SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-aagr-3From_analysisInferred_from_orthology
Sequence_nameCBG19359
Molecular_nameCBG19359a
CBG19359a.1
CBP25992
CBG19359b
CBP19574
CBG19359b.1
Other_nameCBG_19359Accession_evidenceNDBHE601047
Public_nameCbr-aagr-3
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-aagr-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaagr
AlleleWBVar00026527
WBVar00026517
WBVar00026522
RNASeq_FPKMWBls:0000002113.808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
82.6399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
92.4157From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
96.2879From_analysisRNASeq.briggsae.WBls:0000002.control_mean
56.4642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
86.3319From_analysisRNASeq.briggsae.WBls:0000002.control_mean
87.5278From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003137.375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
142.48From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
147.586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
150.983From_analysisRNASeq.briggsae.WBls:0000003.control_mean
167.988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000486.0112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
89.4786From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
92.946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
88.9524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
91.1294From_analysisRNASeq.briggsae.WBls:0000004.control_mean
92.5478From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
95.1895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002724.6159From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
40.6925From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.32219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
89.1393From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
41.1838From_analysisRNASeq.briggsae.WBls:0000027.control_median
44.9572From_analysisRNASeq.briggsae.WBls:0000027.control_mean
57.7516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003583.0782From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038103.599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
67.4477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
76.3717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
86.3192From_analysisRNASeq.briggsae.WBls:0000038.control_mean
87.115From_analysisRNASeq.briggsae.WBls:0000038.control_median
97.8582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041108.797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
110.895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
116.456From_analysisRNASeq.briggsae.WBls:0000041.control_mean
116.783From_analysisRNASeq.briggsae.WBls:0000041.control_median
122.671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
123.463From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
123.067From_analysisRNASeq.briggsae.WBls:0000041.control_median
126.642From_analysisRNASeq.briggsae.WBls:0000041.control_mean
138.449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
155.579From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
66.9793From_analysisRNASeq.briggsae.WBls:0000063.control_mean
77.9756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
79.8952From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
83.5917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
93.4341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
68.4293From_analysisRNASeq.briggsae.WBls:0000063.control_mean
75.6791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
78.9354From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010185.4456From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
89.1393From_analysisRNASeq.briggsae.total_over_all_stages.control_median
89.6453From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
90.7775From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00142097
00142098
00142099
00142100
Ortholog (48)
ParalogWBGene00025355Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030014Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032632Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040099Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbohydrate binding activity and hydrolase activity, hydrolyzing O-glycosyl compounds. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans aagr-3. In C. elegans, aagr-3 is involved in glycogen catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19359a
CBG19359b
Corresponding_CDS_historyCBG19359:bp194
Corresponding_transcriptCBG19359a.1
CBG19359b.1
Other_sequence (40)
Experimental_infoExpr_patternExpr1061622
Microarray_resultsGPL8303_CB6_WBGene00038595_A
GPL8303_CB6_WBGene00038595_B
GPL14143_CBG19359_568-627_0.789_161_C
GPL14143_CBG19359_1109-1168_0.810_130_B
GPL14143_CBG19359_1178-1237_0.806_133_A
MethodGene