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WormBase Tree Display for Gene: WBGene00038536

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Name Class

WBGene00038536SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-acs-14From_analysisInferred_from_orthology
Sequence_nameCBG19289
Molecular_nameCBG19289
CBG19289.1
CBP04491
Other_nameCBG_19289Accession_evidenceNDBHE601047
Public_nameCbr-acs-14
DB_infoDatabaseNDBlocus_tagCBG_19289
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-acs-14
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacs
RNASeq_FPKMWBls:000000238.7703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
47.0466From_analysisRNASeq.briggsae.WBls:0000002.control_mean
49.7071From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
52.6623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
39.0116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
44.3593From_analysisRNASeq.briggsae.WBls:0000002.control_median
45.0378From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000318.4377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
26.2738From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
34.11From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
20.3325From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
24.2934From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000433.9124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
35.3097From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
36.7069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
32.3833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
33.1054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
34.2104From_analysisRNASeq.briggsae.WBls:0000004.control_mean
34.9442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002719.7015From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.92543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
46.5342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.645From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
25.7203From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.7108From_analysisRNASeq.briggsae.WBls:0000027.control_median
43.7767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003564.3779From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003823.4888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
61.4387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
61.8335From_analysisRNASeq.briggsae.WBls:0000038.control_mean
66.6859From_analysisRNASeq.briggsae.WBls:0000038.control_median
71.9331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
90.4734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004129.1981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
33.5762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
33.6091From_analysisRNASeq.briggsae.WBls:0000041.control_median
33.6421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
35.6979From_analysisRNASeq.briggsae.WBls:0000041.control_mean
46.3752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
37.7434From_analysisRNASeq.briggsae.WBls:0000041.control_median
37.8924From_analysisRNASeq.briggsae.WBls:0000041.control_mean
41.8447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
42.7184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
52.1009From_analysisRNASeq.briggsae.WBls:0000063.control_mean
59.3928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
65.7456From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
67.0303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
68.3358From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
47.27From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
51.2957From_analysisRNASeq.briggsae.WBls:0000063.control_mean
62.5692From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010146.0861From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
46.5342From_analysisRNASeq.briggsae.total_over_all_stages.control_median
42.2816From_analysisRNASeq.briggsae.total_over_all_stages.control_median
43.9969From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (52)
Paralog (17)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: AMP-binding enzyme; AMP-dependent synthetase/ligase; AMP-binding enzyme C-terminal domain; and AMP-binding enzyme, C-terminal domain. Is an ortholog of C. elegans acs-14.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19289
Corresponding_CDS_historyCBG19289:bp194
Corresponding_transcriptCBG19289.1
Other_sequence (127)
Experimental_infoExpr_patternExpr1058918
Microarray_resultsGPL8303_CB6_WBGene00038536_A
GPL8303_CB6_WBGene00038536_B
GPL8303_CB6_WBGene00038536_C
GPL8303_CB6_WBGene00038536_D
GPL8303_CB6_WBGene00038536_E
GPL14143_CBG19289_1148-1207_0.940_6_B
GPL14143_CBG19289_1273-1332_0.929_9_C
GPL14143_CBG19289_1346-1405_0.921_11_A
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_upregulated
WBPaper00051425:CB_L4_vs_embryo_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene