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WormBase Tree Display for Gene: WBGene00038353

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Name Class

WBGene00038353SMapS_parentSequencecb25.fpc4126
IdentityVersion3
NameCGC_nameCbr-npa-1From_analysisInferred_from_orthology
Sequence_nameCBG19076
Molecular_nameCBG19076a
CBG19076a.1
CBP45960
CBG19076b
CBP38647
CBG19076b.1
Other_nameCBG_19076Accession_evidenceNDBHE601047
Public_nameCbr-npa-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-npa-1
331 Aug 2016 10:30:13WBPerson4025EventSplit_intoWBGene00270737
Split_intoWBGene00270737
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnpa
AlleleWBVar00026242
WBVar00026257
WBVar00127185
WBVar00026247
WBVar00127186
WBVar00127187
WBVar00026252
WBVar00127188
RNASeq_FPKMWBls:0000002176.631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
218.109From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
229.209From_analysisRNASeq.briggsae.WBls:0000002.control_mean
292.887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
187.789From_analysisRNASeq.briggsae.WBls:0000002.control_mean
197.37From_analysisRNASeq.briggsae.WBls:0000002.control_median
63.5279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.080751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
12.6378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
6.35927From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.0236From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.35226From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000425.3516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
25.6225From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
25.8934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
23.2913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
24.0556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
25.1905From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.3607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027131.218From_analysisRNASeq.briggsae.WBls:0000027.control_mean
23.5717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
299.497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
70.5861From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
185.042From_analysisRNASeq.briggsae.WBls:0000027.control_median
274.601From_analysisRNASeq.briggsae.WBls:0000027.control_mean
704.749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035889.103From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038258.059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
41.9304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
429.341From_analysisRNASeq.briggsae.WBls:0000038.control_mean
440.832From_analysisRNASeq.briggsae.WBls:0000038.control_median
623.605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
793.77From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041116.51From_analysisRNASeq.briggsae.WBls:0000041.control_mean
188.417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
86.5416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
93.6957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
95.5416From_analysisRNASeq.briggsae.WBls:0000041.control_median
97.3875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
142.902From_analysisRNASeq.briggsae.WBls:0000041.control_median
150.506From_analysisRNASeq.briggsae.WBls:0000041.control_mean
205.645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
231.351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063105.066From_analysisRNASeq.briggsae.WBls:0000063.control_mean
122.776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
130.086From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
134.032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
138.436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
132.059From_analysisRNASeq.briggsae.WBls:0000063.control_median
134.146From_analysisRNASeq.briggsae.WBls:0000063.control_mean
279.546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101130.086From_analysisRNASeq.briggsae.total_over_all_stages.control_median
194.593From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
126.431From_analysisRNASeq.briggsae.total_over_all_stages.control_median
189.765From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: DVA-1 superfamily; Nematode polyprotein allergen ABA-1; and Polyprotein allergen, nematode. Is an ortholog of C. elegans npa-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19076a
CBG19076b
Corresponding_CDS_historyCBG19076:bp194
CBG19076:bp255
Corresponding_transcriptCBG19076a.1
CBG19076b.1
Other_sequence (24)
Experimental_infoExpr_patternExpr1066227
Microarray_resultsGPL8303_CB6_WBGene00038353_A
GPL8303_CB6_WBGene00038353_B
GPL14143_CBG19076_2731-2790_0.875_40_B
GPL14143_CBG19076_3109-3168_0.899_18_C
GPL14143_CBG19076_3350-3409_0.903_11_A
MethodGene