WormBase Tree Display for Gene: WBGene00038226

WBGene00038226 SMap: S_parent: Sequence: cb25.fpc4126
  Identity: Version: 3
    Name: Sequence_name: CBG18927
      Molecular_name: CBG18927
        CBG18927.1
        CBP27100
      Other_name: CBG_18927 Accession_evidence: NDB HE601047
      Public_name: CBG18927
    DB_info: Database: NDB locus_tag CBG_18927
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:08 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-gfi-1
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 187.441 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        199.831 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        360.863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        51.1874 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        143.595 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        165.518 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        185.772 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 10.5715 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        5.28575 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        10.2842 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        6.9519 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 41.687 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        43.4933 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        45.2996 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        45.1313 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        46.3927 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        48.0619 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        51.7835 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 139.092 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        166.542 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        171.292 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        79.4428 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        168.917 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        292.755 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        753.744 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 704.02 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 341.166 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        377.103 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        410.064 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        443.024 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        489.494 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        796.684 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 116.038 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        119.493 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        140.073 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        173.548 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        72.3471 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        92.0038 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        44.9926 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        5.12231 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        82.1755 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        88.0145 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        545.024 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        659.103 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        663.837 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        674.982 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        727.199 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        167.801 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        482.154 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        661.47 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 173.548 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        284.409 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        155.068 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        250.483 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (29)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: ET module and ET repeat. Is an ortholog of C. elegans F57F4.4 and gfi-1. In C. elegans, gfi-1 is involved in chromatin remodeling. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG18927
    Corresponding_CDS_history: CBG18927:bp194
    Corresponding_transcript: CBG18927.1
    Other_sequence (27)
  Experimental_info: Expr_pattern: Expr1058094
    Microarray_results: GPL8303_CB6_WBGene00038226_A
      GPL8303_CB6_WBGene00038226_C
      GPL8303_CB6_WBGene00038226_D
      GPL8303_CB6_WBGene00038226_E
      GPL14143_CBG18927_6338-6397_0.837_42_C
      GPL14143_CBG18927_6768-6827_0.920_3_B
      GPL14143_CBG18927_6853-6912_0.920_2_A
  Remark: [180319 gw3] The CGC name Cbr-gfi-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene