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WormBase Tree Display for Gene: WBGene00037165

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Name Class

WBGene00037165SMapS_parentSequencecb25.fpc4069c
IdentityVersion2
NameSequence_nameCBG17574
Molecular_nameCBG17574
CBG17574.1
CBP47876
Other_nameCBG_17574Accession_evidenceNDBHE600959
Public_nameCBG17574
DB_infoDatabaseNDBlocus_tagCBG_17574
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
212 Jan 2017 16:33:20WBPerson4025EventSplit_intoWBGene00271499
Split_intoWBGene00271499
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00023992
WBVar00023982
WBVar00023987
RNASeq_FPKMWBls:00000020.797069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.30744From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.59486From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.68008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.31973From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.33201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.02915From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.014203From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.028406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.009469From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.054388From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.108776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.035148From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.066965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.247418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.2885From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.74997From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.71398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.2274From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.85405From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.16629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.69259From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.403737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
10.5998From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.58716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.21891From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.85066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.36034From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000412.1064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.08473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.22263From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.24152From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.36052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.41444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.98415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.79866From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.84172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.96322From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000631.76838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.84048From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.11793From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.40568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.9104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.91063From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.18967From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.26141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.11793From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.47623From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.93739From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.17008From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140594
00140595
00140596
00140597
00140598
Ortholog (23)
Paralog (29)
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans pgp-1; pgp-2; and pgp-5. In C. elegans, pgp-1 is involved in defense response to other organism; response to metal ion; and response to nematicide.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17574
Corresponding_CDS_historyCBG17574:bp257
Corresponding_transcriptCBG17574.1
Other_sequenceAcan_isotig22981
JI225225.1
Tcol_isotig23436
HC00679
Hbac_isotig07027
Experimental_infoExpr_patternExpr1065966
Microarray_resultsGPL14143_CBG17574_2780-2839_0.775_91_B
GPL14143_CBG17574_2924-2983_0.776_86_A
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
MethodGene