WormBase Tree Display for Gene: WBGene00037162

WBGene00037162 SMap: S_parent: Sequence: cb25.fpc4069c
  Identity: Version: 3
    Name: CGC_name: Cbr-pgp-8 From_analysis: Inferred_from_orthology
      Sequence_name: CBG17570
      Molecular_name: CBG17570
        CBG17570.1
        CBP45044
      Other_name: CBG_17570 Accession_evidence: NDB HE600959
      Public_name: Cbr-pgp-8
    DB_info: Database: NDB locus_tag CBG_17570
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:06 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-pgp-8
        3 31 Aug 2016 10:30:13 WBPerson4025 Event: Split_into: WBGene00270749
      Split_into: WBGene00270749
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pgp
    RNASeq_FPKM: WBls:0000002 0.828958 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.862855 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.913558 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.04886 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.405387 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.786515 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.845906 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.03427 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.06854 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.022847 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.052502 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.105004 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.050211 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.071752 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.097054 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.258302 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.106594 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.241149 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.616854 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.276902 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.292665 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.447211 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 1.27983 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.091686 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.821036 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.860009 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.979169 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.09833 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1.23412 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.426288 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.986206 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.06271 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.13921 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.15455 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.0665 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1.60285 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.78128 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.34232 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        3.72717 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.096856 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.125217 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.13631 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.148451 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.244468 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.142381 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.287824 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.10086 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.616854 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.715432 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.436749 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.767124 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00140589
      00140590
      00140591
      00140592
      00140593
    Ortholog (24)
    Paralog (29)
    Structured_description: Automated_description: Predicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans pgp-8. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG17570
    Corresponding_CDS_history: CBG17570:bp194
      CBG17570:bp255
    Corresponding_transcript: CBG17570.1
    Other_sequence: FR691855.1
      JO469859.1
  Experimental_info: Expr_pattern: Expr1067749
    Microarray_results: GPL14143_CBG17570_3700-3759_0.786_34_C
      GPL14143_CBG17570_3770-3829_0.791_21_B
      GPL14143_CBG17570_3872-3931_0.807_4_A
  Method: Gene