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WormBase Tree Display for Gene: WBGene00036883

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Name Class

WBGene00036883SMapS_parentSequencecb25.fpc4066
IdentityVersion2
NameCGC_nameCbr-unc-115From_analysisInferred_from_orthology
Sequence_nameCBG17160
Molecular_nameCBG17160
CBG17160.1
CBP44807
Other_nameCBG_17160Accession_evidenceNDBHE601483
Public_nameCbr-unc-115
DB_infoDatabaseNDBlocus_tagCBG_17160
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-115
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00124651
WBVar00124652
WBVar00124647
WBVar00124648
WBVar00124649
WBVar00124650
RNASeq_FPKMWBls:000000225.5796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
35.6463From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
43.6304From_analysisRNASeq.briggsae.WBls:0000002.control_mean
69.6653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
24.3494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
30.6129From_analysisRNASeq.briggsae.WBls:0000002.control_median
38.8102From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000313.9208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
16.8667From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
19.8126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
16.1489From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
16.6274From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004112.237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
112.647From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
113.057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
113.315From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
118.096From_analysisRNASeq.briggsae.WBls:0000004.control_mean
119.885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
131.986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:000002419.3696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
29.2855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
38.6292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
40.1491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
41.8083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
47.2627From_analysisRNASeq.briggsae.WBls:0000024.control_median
52.7172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
55.9421From_analysisRNASeq.briggsae.WBls:0000024.control_mean
89.0938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
26.3864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
29.6196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
30.7069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
WBls:000002710.3407From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
27.4096From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
41.3363From_analysisRNASeq.briggsae.WBls:0000027.control_mean
86.2586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
41.4754From_analysisRNASeq.briggsae.WBls:0000027.control_median
44.8876From_analysisRNASeq.briggsae.WBls:0000027.control_mean
55.5413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003551.4909From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003820.1758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
36.9235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
38.1349From_analysisRNASeq.briggsae.WBls:0000038.control_median
38.7267From_analysisRNASeq.briggsae.WBls:0000038.control_mean
39.3463From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
58.461From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004112.8131From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
14.7656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
15.5468From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
16.8967From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.6799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
15.7974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
16.0627From_analysisRNASeq.briggsae.WBls:0000041.control_median
17.2219From_analysisRNASeq.briggsae.WBls:0000041.control_mean
19.9473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.5886From_analysisRNASeq.briggsae.WBls:0000063.control_mean
24.3843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
25.6818From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
26.3332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
26.5438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
17.4503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
20.0656From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.0331From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010126.5438From_analysisRNASeq.briggsae.total_over_all_stages.control_median
38.4353From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
26.4385From_analysisRNASeq.briggsae.total_over_all_stages.control_median
42.8696From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00006839Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00063125Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00145068Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00108280Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00131837Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CBOVI.g2923Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2924Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g8662Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17564Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16076Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25090Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12721Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1837Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g27386Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15896Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00262.g8066Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-115Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13685Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00352.g9949Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01376Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023530Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07537Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0066500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19857Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, LIM-type and LIM domain. Is an ortholog of C. elegans unc-115. In C. elegans, unc-115 is involved in neuron projection morphogenesis; regulation of filopodium assembly; and regulation of lamellipodium assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17160
Corresponding_CDS_historyCBG17160:bp194
CBG17160:bp255
Corresponding_transcriptCBG17160.1
Other_sequenceEX554792.1
EX501236.1
FG581201.1
EY468389.1
FC555084.1
Oden_isotig17092
Oden_isotig17091
HGC11438_1
TSC07351_1
SSC02760_1
Acan_isotig15414
JI477810.1
AYC03283_1
FG585183.1
Acan_isotig07833
EY471799.1
JI459143.1
AE04384
Hbac_isotig05495
EY458363.1
CBC04122_1
JI483553.1
ES568553.1
ES567333.1
FK801194.1
ACC05561_1
FC545574.1
SC00424
TSC14992_1
HG04516
ACC12770_1
CJC12029_1
FC539864.1
EX547270.1
Dviv_isotig22861
FC549488.1
Tcol_isotig20958
GR977447.1
JI168575.1
EY458769.1
FC541906.1
JI460268.1
JI469214.1
FC547856.1
Name_isotig00999
Experimental_infoExpr_patternExpr1061961
Microarray_resultsGPL8303_CB6_WBGene00036883_A
GPL8303_CB6_WBGene00036883_B
GPL14143_CBG17160_1201-1260_0.793_8_C
GPL14143_CBG17160_1335-1394_0.786_13_B
GPL14143_CBG17160_1794-1853_0.766_32_A
MethodGene