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WormBase Tree Display for Gene: WBGene00036138

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Name Class

WBGene00036138SMapS_parentSequencecb25.fpc4033c
IdentityVersion5
NameCGC_nameCbr-set-24From_analysisInferred_from_orthology
Sequence_nameCBG16072
Molecular_nameCBG16072
CBG16072.1
CBP36936
Other_nameCBG_16072Accession_evidenceNDBHE600961
Cbr-set-24From_analysisInferred_from_orthology
Cbr-set-24.1From_analysisInferred_from_orthology
Public_nameCbr-set-24
DB_infoDatabaseNDBlocus_tagCBG_16072
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-set-24
308 May 2019 10:09:28WBPerson1983Name_changeCGC_nameRemoved
404 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameCbr-set-24.1
504 Jun 2020 14:38:21WBPerson1983Name_changeCGC_nameCbr-set-24
Other_nameCbr-set-24.1
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbr-set-24.1
Other_nameCbr-set-24
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:00000022.33199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.212From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.81934From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.91404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.76758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.98979From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.5564From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000317.1715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
17.5264From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
17.8814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
16.0528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
17.0352From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000414.769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
15.2631From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.7572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
15.7372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
16.1276From_analysisRNASeq.briggsae.WBls:0000004.control_mean
16.8679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
17.5068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.150768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.62688From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.0079From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.24606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.97289From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.33565From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.31889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.22573From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.519993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.7095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.90121From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.95938From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.20926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.1661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000413.87713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.04778From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.24003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.28494From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.32985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.74412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.8303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.2138From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.26138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.914179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.21281From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.58616From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.71253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.85116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.51579From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.64935From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.03073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.87713From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.9663From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.76717From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.06306From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00012845Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00143670Caenorhabditis brenneriFrom_analysisOMA
WBGene00219184Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00128795Caenorhabditis japonicaFrom_analysisInparanoid_8
CSP26.g4581Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP40.g11763Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_X.g22678Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_01323.g20102Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_09002.g39151Caenorhabditis sinicaFrom_analysisWormBase-Compara
ParalogWBGene00036139Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). Is an ortholog of C. elegans set-24.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16072
Corresponding_CDS_historyCBG16072:bp194
Corresponding_transcriptCBG16072.1
Other_sequenceCR04105
CRC03401_1
Experimental_infoExpr_patternExpr1069950
Microarray_resultsGPL14143_CBG16072_191-250_0.794_25_A
Remark[190507 pad] The CGC name Cbr-set-24 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene