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WormBase Tree Display for Gene: WBGene00035294

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Name Class

WBGene00035294SMapS_parentSequencecb25.fpc3857b
IdentityVersion2
NameCGC_nameCbr-ptr-10From_analysisInferred_from_orthology
Sequence_nameCBG14920
Molecular_nameCBG14920
CBG14920.1
CBP09771
Other_nameCBG_14920Accession_evidenceNDBHE600904
Public_nameCbr-ptr-10
DB_infoDatabaseNDBlocus_tagCBG_14920
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-ptr-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classptr
RNASeq_FPKMWBls:00000024.84128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.8371From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.14935From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.52068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.94524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.86414From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.49532From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000031.75454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.22744From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.70035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
4.1948From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.12951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000419.6454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
20.6327From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
21.62From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
17.5143From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
18.3924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
19.0741From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
19.2492From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (11)
WBls:00000270.448749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.06786From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
16.0874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.868From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.02732From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.98679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.1477From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003539.1749From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
13.0182From_analysisRNASeq.briggsae.WBls:0000038.control_mean
32.6212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.41319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.9022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.0191From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000410.199524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.238611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.276038From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.313465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.631735From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.77534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.490295From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.667126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.711199From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.07313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.06191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.166542From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.172195From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.202282From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.43024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.049065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.114226From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.151673From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.75454From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.76152From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.86029From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.7083From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138768
Ortholog (37)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans ptr-10. In C. elegans, ptr-10 is involved in molting cycle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14920
Corresponding_CDS_historyCBG14920:bp194
CBG14920:bp255
Corresponding_transcriptCBG14920.1
Other_sequence (24)
Experimental_infoExpr_patternExpr1068503
Microarray_resultsGPL8303_CB6_WBGene00035294_A
GPL8303_CB6_WBGene00035294_B
GPL14143_CBG14920_2113-2172_0.724_194_C
GPL14143_CBG14920_2157-2216_0.935_1_A
GPL14143_CBG14920_2421-2480_0.934_2_B
MethodGene