WormBase Tree Display for Gene: WBGene00034748

WBGene00034748 SMap: S_parent: Sequence: cb25.fpc3857a
  Identity: Version: 4
    Name: CGC_name: Cbr-irg-7 From_analysis: Inferred_from_orthology
      Sequence_name: CBG14163
      Molecular_name: CBG14163
        CBG14163.1
        CBP48124
      Other_name: CBG_14163 Accession_evidence: NDB HE600983
        Cbr-drd-2 From_analysis: Inferred_from_orthology
      Public_name: Cbr-irg-7
    DB_info: Database: NDB locus_tag CBG_14163
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 29 Apr 2015 12:22:06 WBPerson2970 Name_change: CGC_name: Cbr-drd-2
        3 02 Mar 2017 23:30:57 WBPerson4025 Event: Split_into: WBGene00271603
        4 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbr-irg-7
                Other_name: Cbr-drd-2
      Split_into: WBGene00271603
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: irg
    RNASeq_FPKM: WBls:0000002 103.358 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        105.806 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        137.026 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        77.0336 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        120.192 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        123.723 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        177.475 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 2.01707 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        4.76394 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        7.5108 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        5.12159 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        5.83691 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 28.34 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        28.7355 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        29.131 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        27.0883 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        29.3753 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        29.5509 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        32.7662 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 100.131 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        186.648 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        32.339 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        81.4052 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        125.174 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        134.027 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        200.303 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 223.58 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 127.755 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        167.596 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        232.046 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        269.911 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        296.495 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        487.799 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 104.032 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        47.823 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        56.4301 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        65.6778 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        70.8027 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        74.9255 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        25.2189 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        62.2124 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        62.7374 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        67.9947 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 140.104 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        171.453 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        172.98 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        175.483 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        180.603 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        129.489 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        172.217 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        76.4171 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 104.032 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        121.376 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        109.541 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        84.8882 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    Ortholog (31)
    Paralog: WBGene00036456 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00271603 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: von Willebrand factor, type A; C-type lectin fold; von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; C-type lectin-like/link domain superfamily; Lectin C-type domain; Growth factor receptor cysteine-rich domain superfamily; EGF-like domain; C-type lectin-like; and MD domain. Is an ortholog of C. elegans irg-7. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG14163
    Corresponding_CDS_history: CBG14163:bp258
    Corresponding_transcript: CBG14163.1
    Other_sequence (17)
  Experimental_info: Microarray_results: GPL14143_CBG14163_4447-4506_0.801_28_C
  Method: Gene