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WormBase Tree Display for Gene: WBGene00033166

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Name Class

WBGene00033166SMapS_parentSequencecb25.fpc2887b
IdentityVersion3
NameCGC_nameCbr-swsn-2.2From_analysisInferred_from_orthology
Sequence_nameCBG12176
Molecular_nameCBG12176
CBG12176.1
CBP46414
Other_nameCBG_12176Accession_evidenceNDBHE600958
Public_nameCbr-swsn-2.2
DB_infoDatabaseNDBlocus_tagCBG_12176
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
211 Feb 2011 15:56:39WBPerson2970Name_changeCGC_nameCbr-swsn-2.2
331 Aug 2016 10:30:13WBPerson4025EventSplit_intoWBGene00270365
Split_intoWBGene00270365
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classswsn
RNASeq_FPKMWBls:000000232.5375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
42.1933From_analysisRNASeq.briggsae.WBls:0000002.control_mean
42.6538From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
51.3887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
47.0213From_analysisRNASeq.briggsae.WBls:0000002.control_median
48.6278From_analysisRNASeq.briggsae.WBls:0000002.control_mean
67.9312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003104.119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
112.67From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
121.221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
107.459From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
110.933From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000471.3647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
72.3406From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
73.3165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
70.085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
72.0489From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
74.2505From_analysisRNASeq.briggsae.WBls:0000004.control_mean
84.4373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.17623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.7752From_analysisRNASeq.briggsae.WBls:0000027.control_mean
29.6127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.53671From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.7003From_analysisRNASeq.briggsae.WBls:0000027.control_median
14.0474From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.8638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003527.4567From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003819.8969From_analysisRNASeq.briggsae.WBls:0000038.control_mean
21.7873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
22.4536From_analysisRNASeq.briggsae.WBls:0000038.control_median
23.12From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
24.7736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
9.90685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004128.0599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
64.442From_analysisRNASeq.briggsae.WBls:0000041.control_mean
73.1555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
75.6789From_analysisRNASeq.briggsae.WBls:0000041.control_median
78.2023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
78.3505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
46.2092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
47.4936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
58.5785From_analysisRNASeq.briggsae.WBls:0000041.control_mean
60.3246From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006323.6217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
25.1793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
28.3465From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
31.4941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
31.7555From_analysisRNASeq.briggsae.WBls:0000063.control_mean
50.1359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
29.9203From_analysisRNASeq.briggsae.WBls:0000063.control_median
33.2841From_analysisRNASeq.briggsae.WBls:0000063.control_mean
40.9272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010132.5375From_analysisRNASeq.briggsae.total_over_all_stages.control_median
41.6081From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
38.0583From_analysisRNASeq.briggsae.total_over_all_stages.control_median
46.4234From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
ParalogWBGene00027694Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031387Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SWIB/MDM2 domain superfamily; SWIB/MDM2 domain; and SWIB domain. Is an ortholog of C. elegans swsn-2.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12176
Corresponding_CDS_historyCBG12176:bp255
Corresponding_transcriptCBG12176.1
Other_sequenceCRC03646_1
CJC12848_1
CBC13802_1
CBC03933_1
CR05857
CR00337
CRC01088_1
FK801365.1
Experimental_infoExpr_patternExpr1064266
Microarray_resultsGPL8303_CB6_WBGene00033166_A
GPL8303_CB6_WBGene00033166_B
GPL14143_CBG12176_1713-1772_0.936_3_C
GPL14143_CBG12176_1828-1887_0.936_2_B
GPL14143_CBG12176_1843-1902_0.975_1_A
MethodGene