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WormBase Tree Display for Gene: WBGene00032720

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Name Class

WBGene00032720SMapS_parentSequencecb25.fpc2501a
IdentityVersion3
NameCGC_nameCbr-ret-1From_analysisInferred_from_orthology
Sequence_nameCBG11624
Molecular_name (12)
Other_nameCBG_11624Accession_evidenceNDBHE600985
CBG_27216
Public_nameCbr-ret-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ret-1
328 Apr 2017 01:35:57WBPerson4025EventAcquires_mergeWBGene00088630
Acquires_mergeWBGene00088630
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classret
Allele (14)
RNASeq_FPKMWBls:0000002339.676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
341.582From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
351.327From_analysisRNASeq.briggsae.WBls:0000002.control_mean
372.724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
357.153From_analysisRNASeq.briggsae.WBls:0000002.control_median
388.605From_analysisRNASeq.briggsae.WBls:0000002.control_mean
500.44From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003193.082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
248.385From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
303.688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
197.111From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
231.294From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004593.544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
607.679From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
621.813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
532.279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
631.536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
646.169From_analysisRNASeq.briggsae.WBls:0000004.control_mean
851.675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027100.245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
242.018From_analysisRNASeq.briggsae.WBls:0000027.control_mean
271.014From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
354.796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
265.068From_analysisRNASeq.briggsae.WBls:0000027.control_mean
302.616From_analysisRNASeq.briggsae.WBls:0000027.control_median
334.218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035356.354From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038186.975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
253.432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
269.027From_analysisRNASeq.briggsae.WBls:0000038.control_median
284.622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
289.676From_analysisRNASeq.briggsae.WBls:0000038.control_mean
433.676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041312.974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
430.276From_analysisRNASeq.briggsae.WBls:0000041.control_mean
451.921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
462.241From_analysisRNASeq.briggsae.WBls:0000041.control_median
472.562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
483.648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
241.151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
298.065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
376.72From_analysisRNASeq.briggsae.WBls:0000041.control_mean
382.448From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
344.318From_analysisRNASeq.briggsae.WBls:0000063.control_mean
381.674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
387.984From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
392.709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
559.225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
351.778From_analysisRNASeq.briggsae.WBls:0000063.control_mean
388.53From_analysisRNASeq.briggsae.WBls:0000063.control_median
389.075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101345.73From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
356.354From_analysisRNASeq.briggsae.total_over_all_stages.control_median
361.448From_analysisRNASeq.briggsae.total_over_all_stages.control_median
368.466From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (27)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Reticulon. Is an ortholog of C. elegans ret-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11624a
CBG11624b
CBG11624c
CBG11624d
Corresponding_CDS_historyCBG11624:bp194
CBG11624a:bp259
Corresponding_transcriptCBG11624a.1
CBG11624b.1
CBG11624c.1
CBG11624d.1
Other_sequence (72)
Experimental_infoExpr_patternExpr1067281
Expr1068881
Microarray_resultsGPL14143_CBG11624_8028-8087_0.915_2_B
GPL14143_CBG11624_8254-8313_0.792_106_A
GPL14143_CBG11624_8373-8432_0.736_588_C
GPL14143_CBG27216_31-90_0.913_5_B
GPL14143_CBG27216_124-183_0.925_4_C
GPL14143_CBG27216_162-221_0.931_1_A
MethodGene