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WormBase Tree Display for Gene: WBGene00032243

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Name Class

WBGene00032243SMapS_parentSequencecb25.fpc2441
IdentityVersion2
NameCGC_nameCbr-cdh-7From_analysisInferred_from_orthology
Sequence_nameCBG11054
Molecular_nameCBG11054
CBG11054.1
CBP46337
Other_nameCBG_11054Accession_evidenceNDBHE601351
Public_nameCbr-cdh-7
DB_infoDatabaseNDBlocus_tagCBG_11054
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-cdh-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdh
AlleleWBVar00012522
WBVar00012517
RNASeq_FPKMWBls:000000210.5731From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.6051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.16825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.78215From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.87931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.37068From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.30644From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.234096From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.239508From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.244921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.248766From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.267281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.398592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.429246From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.459899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.122381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.142901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.181577From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.26107From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.56632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.1262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.98888From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.56047From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.52036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
1.75462From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.55044From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003550.3952From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.2961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
18.848From_analysisRNASeq.briggsae.WBls:0000038.control_mean
50.3969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.21985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.47931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.8877From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000410.422797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.477439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.490727From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.504014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.980258From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.51678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.573878From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.643741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.745567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.885056From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630.388108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.459423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.50689From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.515767From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.528343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.696069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.205604From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.464073From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.483157From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001010.528343From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.31237From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.517617From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.78335From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00135684
00135685
00135686
Ortholog (24)
ParalogWBGene00023547Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031906Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032811Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035878Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036312Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037547Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041052Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042583Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00206398Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Is an ortholog of C. elegans cdh-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11054
Corresponding_CDS_historyCBG11054:bp194
CBG11054:bp255
Corresponding_transcriptCBG11054.1
Other_sequenceCJC04923_1
CJC14481_1
Experimental_infoExpr_patternExpr1052979
Microarray_resultsGPL8303_CB6_WBGene00032243_A
GPL8303_CB6_WBGene00032243_B
GPL14143_CBG11054_3068-3127_0.765_244_C
GPL14143_CBG11054_3708-3767_0.916_9_A
GPL14143_CBG11054_4093-4152_0.934_1_B
MethodGene