WormBase Tree Display for Gene: WBGene00031858

WBGene00031858 SMap: S_parent: Sequence: cb25.fpc2310c
  Identity: Version: 6
    Name: CGC_name: Cbr-gcy-6 From_analysis: Inferred_from_orthology
      Sequence_name: CBG10474
      Molecular_name: CBG10474
        CBG10474.1
        CBP49789
      Other_name: CBG_10474 Accession_evidence: NDB HE600935
        CBG_10472
      Public_name: CBG10474
    DB_info: Database: NDB locus_tag CBG_10474
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:01 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbr-gcy-6
        3 17 Sep 2018 14:44:56 WBPerson4025 Event: Acquires_merge: WBGene00031856
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 04 Feb 2020 15:43:56 WBPerson1983 Name_change: CGC_name: Cbr-gcy-6
        6 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Cbr-gcy-6
      Acquires_merge: WBGene00031856
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gcy
    RNASeq_FPKM: WBls:0000002 0.024128 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.038875 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.046429 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.076285 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.028865 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.03387 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.042038 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.058336 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.175007 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (11)
      WBls:0000027 0.044289 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.083989 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.207677 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.091825 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.097832 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.139361 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.05188 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.062367 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.120516 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.148772 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.178666 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.354057 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 0.018208 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.069678 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.075704 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.081729 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.257791 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.861547 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.294526 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.352145 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.507322 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.574386 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.046181 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.056537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.081381 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.304185 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.051359 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.082764 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.089682 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.046181 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.136822 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.04903 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.144275 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00135312
      00135313
      00135314
      00135315
      00135316
      00135317
      00135318
    Ortholog (54)
    Paralog (39)
    Structured_description: Automated_description: Predicted to enable guanylate cyclase activity and protein kinase activity. Predicted to be involved in cGMP biosynthetic process and intracellular signal transduction. Predicted to be located in membrane. Is an ortholog of C. elegans gcy-6. In C. elegans, gcy-6 is involved in several processes, including chemosensory behavior; positive regulation of calcium-mediated signaling; and response to magnesium ion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG10474
    Corresponding_CDS_history: CBG10474:bp267
    Corresponding_transcript: CBG10474.1
    Other_sequence: EY472711.1
      ACC06252_1
      EY472730.1
  Experimental_info: Expr_pattern: Expr1059269
      Expr1059700
    Microarray_results: GPL8303_CB6_WBGene00031856_A
      GPL8303_CB6_WBGene00031856_B
      GPL8303_CB6_WBGene00031858_A
      GPL14143_CBG10472_454-513_0.761_138_B
      GPL14143_CBG10472_457-516_0.749_146_C
      GPL14143_CBG10472_462-521_0.836_59_A
      GPL14143_CBG10474_1718-1777_0.912_11_C
      GPL14143_CBG10474_1941-2000_0.878_33_A
      GPL14143_CBG10474_2033-2092_0.898_16_B
  Remark: [190208 pad] The CGC name Cbr-gcy-6 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200603 pad] The CGC name Cbr-gcy-6 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene