WormBase Tree Display for Gene: WBGene00031323

WBGene00031323 SMap: S_parent: Sequence: cb25.fpc2234
  Identity: Version: 4
    Name: CGC_name: Cbr-dod-6 From_analysis: Inferred_from_orthology
      Sequence_name: CBG09803
      Molecular_name: CBG09803
        CBG09803.1
        CBP08419
      Other_name: CBG_09803 Accession_evidence: NDB HE601459
        Cbr-dod-6.2 From_analysis: Inferred_from_orthology
      Public_name: Cbr-dod-6
    DB_info: Database: NDB locus_tag CBG_09803
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbr-dod-6
        3 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Cbr-dod-6.2
                Other_name: Cbr-dod-6
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Cbr-dod-6
                Other_name: Cbr-dod-6.2
        5 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbr-dod-6.2
                Other_name: Cbr-dod-6
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cbr-dod-6
                Other_name: Cbr-dod-6.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dod
    RNASeq_FPKM: WBls:0000002 12.4631 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        179.498 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        262.649 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        263.381 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        136.592 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        168.771 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        199.62 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.352641 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        1.85967 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        3.36669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        2.59798 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        4.0746 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 26.9411 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        27.3603 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        27.7796 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        27.7243 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        29.6995 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        31.7002 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        34.3522 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 130.518 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        265.816 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        59.4185 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        607.511 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        310.332 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        321.898 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        490.146 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 186.774 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 181.46 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        181.725 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        203.851 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        225.977 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        226.177 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        315.545 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 137.135 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        284.99 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        84.2365 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        84.3883 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        89.6579 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        94.9274 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        132.997 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        159.539 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        171.067 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        237.626 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 104.863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        136.231 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        81.7164 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        82.9367 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        83.8958 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        97.9286 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        73.9563 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        83.4163 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        93.9332 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 130.518 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        159.999 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        117.69 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        153.874 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog: WBGene00011869 Caenorhabditis elegans From_analysis: OMA
            WormBase-Compara
      WBGene00142088 Caenorhabditis brenneri From_analysis: OMA
            WormBase-Compara
      WBGene00085206 Caenorhabditis remanei From_analysis: OMA
      WBGene00085211 Caenorhabditis remanei From_analysis: OMA
      WBGene00193272 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP31.g20309 Caenorhabditis uteleia From_analysis: WormBase-Compara
      Sp34_30209210 Caenorhabditis inopinata From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Is an ortholog of C. elegans dod-6. In C. elegans, dod-6 is involved in pharyngeal gland morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG09803
    Corresponding_CDS_history: CBG09803:bp194
      CBG09803:bp256
    Corresponding_transcript: CBG09803.1
    Other_sequence: FD517664.1
      CSC01049_1
      FD517327.1
  Experimental_info: Expr_pattern: Expr1063925
    Microarray_results: GPL8303_CB6_WBGene00031323_A
      GPL8303_CB6_WBGene00031323_B
      GPL14143_CBG09803_69-128_0.953_1_A
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_upregulated
  Method: Gene