WormBase Tree Display for Gene: WBGene00030314

WBGene00030314 SMap: S_parent: Sequence: cb25.fpc2051
  Identity: Version: 2
    Name: CGC_name: Cbr-ccch-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG08548
      Molecular_name: CBG08548
        CBG08548.1
        CBP16308
      Other_name: CBG_08548 Accession_evidence: NDB HE601197
      Public_name: Cbr-ccch-3
    DB_info: Database: NDB locus_tag CBG_08548
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:59 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbr-ccch-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ccch
    RNASeq_FPKM: WBls:0000002 22.9011 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        24.355 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        24.9332 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        25.2306 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        25.0819 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        29.2475 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        43.925 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 111.04 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        70.9854 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        91.0127 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        81.8138 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        87.9464 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 27.6447 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        30.2714 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        32.898 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        30.4535 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        35.1499 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        41.6036 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        43.1497 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.281704 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        4.20637 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.64219 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        7.69522 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.54594 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.10341 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        5.56463 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 5.53486 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.5813 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        4.49403 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        5.94134 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        7.93902 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        8.23834 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        9.9367 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 43.697 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        69.0318 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        73.3224 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        75.2854 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        77.2484 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        81.8594 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        67.8651 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        72.1029 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        88.6252 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 16.4642 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        7.60644 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        8.36826 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        8.60597 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        9.16468 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        11.3126 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        26.0343 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        8.88533 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 24.6428 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        9.9367 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        19.6826 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        30.0967 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00133710
    Ortholog (22)
    Structured_description: Automated_description: Predicted to enable metal ion binding activity. Is an ortholog of C. elegans ccch-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG08548
    Corresponding_CDS_history: CBG08548:bp194
    Corresponding_transcript: CBG08548.1
  Experimental_info: Expr_pattern: Expr1059419
    Microarray_results: GPL8303_CB6_WBGene00030314_A
      GPL8303_CB6_WBGene00030314_B
      GPL8303_CB6_WBGene00030314_C
      GPL14143_CBG08548_321-380_0.834_30_C
      GPL14143_CBG08548_440-499_0.930_5_A
      GPL14143_CBG08548_517-576_0.972_1_B
  Method: Gene