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WormBase Tree Display for Gene: WBGene00029580

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Name Class

WBGene00029580SMapS_parentSequencecb25.fpc0829
IdentityVersion2
NameSequence_nameCBG07586
Molecular_nameCBG07586
CBG07586.1
CBP46770
Other_nameCBG_07586Accession_evidenceNDBHE601041
CBG_07587
Public_nameCBG07586
DB_infoDatabaseNDBlocus_tagCBG_07586
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
231 Aug 2016 10:29:44WBPerson4025EventAcquires_mergeWBGene00029581
Acquires_mergeWBGene00029581
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.314926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.330899From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.524908From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.928899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.410381From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.489862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.516146From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.0342From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
15.5597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.50869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
5.81201From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
8.6268From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000423.0834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
24.74From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
26.3966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
22.2246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
25.1776From_analysisRNASeq.briggsae.WBls:0000004.control_mean
26.7378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
27.4457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.40489From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.21467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.52721From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.567272From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.05442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.625589From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.289672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.325482From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.327281From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.361291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.658161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.246589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.277669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.280594From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.28352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.29474From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.371182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.063836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.291552From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.506518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.094551From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.128972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.343782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.061708From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.099362From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.123417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.343782From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.77804From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.430522From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.34266From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132955
00132956
Ortholog (22)
Structured_descriptionAutomated_descriptionPredicted to enable endopeptidase activity. Predicted to be involved in negative regulation of Wnt signaling pathway. Is an ortholog of C. elegans C05G5.5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07586
Corresponding_CDS_historyCBG07586:bp194
CBG07586:bp255
Corresponding_transcriptCBG07586.1
Other_sequenceName_isotig05358
FC551713.1
FC544288.1
Acan_isotig08546
FC545464.1
ACC15221_1
FC551117.1
Experimental_infoExpr_patternExpr1062127
Microarray_resultsGPL8303_CB6_WBGene00029580_A
GPL8303_CB6_WBGene00029580_B
GPL14143_CBG07586_83-142_0.854_8_A
GPL14143_CBG07586_429-488_0.892_1_B
GPL14143_CBG07586_570-629_0.878_4_C
GPL14143_CBG07587_466-525_0.896_3_C
MethodGene