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WormBase Tree Display for Gene: WBGene00028269

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Name Class

WBGene00028269SMapS_parentSequencecb25.fpc0143a
IdentityVersion3
NameCGC_nameCbr-nprl-2From_analysisInferred_from_orthology
Sequence_nameCBG05911
Molecular_nameCBG05911
CBG05911.1
CBP47549
Other_nameCBG_05911Accession_evidenceNDBHE600909
Public_nameCbr-nprl-2
DB_infoDatabaseNDBlocus_tagCBG_05911
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
211 Apr 2012 13:56:30WBPerson2970Name_changeCGC_nameCbr-nprl-2
306 Mar 2018 14:53:10WBPerson4025EventSplit_intoWBGene00302975
Split_intoWBGene00302975
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnprl
RNASeq_FPKMWBls:000000213.5555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
24.2182From_analysisRNASeq.briggsae.WBls:0000002.control_mean
28.3044From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
30.7948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
24.5639From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
26.9527From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000328.3401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
39.0378From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
49.7356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
34.4125From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
37.4961From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000426.4681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
29.6186From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
32.7691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
18.6138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
21.1355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
25.7535From_analysisRNASeq.briggsae.WBls:0000004.control_mean
29.7809From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002712.8382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.27946From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.9e-05From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
9.6e-05From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.13876From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.27895From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.27742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.55103From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.6695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
12.0589From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.56955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
28.4045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.5921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.1308From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004148.967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
49.9588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
50.8546From_analysisRNASeq.briggsae.WBls:0000041.control_median
51.326From_analysisRNASeq.briggsae.WBls:0000041.control_mean
51.7504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
54.6276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
52.6949From_analysisRNASeq.briggsae.WBls:0000041.control_mean
53.0608From_analysisRNASeq.briggsae.WBls:0000041.control_median
54.3712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
56.4946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006312.7725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
19.2737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
22.6137From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
24.2355From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.6309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
40.8868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
24.1223From_analysisRNASeq.briggsae.WBls:0000063.control_median
25.2687From_analysisRNASeq.briggsae.WBls:0000063.control_mean
30.4347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010122.6137From_analysisRNASeq.briggsae.total_over_all_stages.control_median
23.1465From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
25.0097From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
25.1894From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Contained_in_operonCBOP0015
Ortholog (34)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Nitrogen permease regulator 2. Is an ortholog of C. elegans nprl-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05911
Corresponding_CDS_historyCBG05911:bp194
CBG05911:bp241
CBG05911:bp256
CBG05911a:bp264
CBG05911b:bp264
Corresponding_transcriptCBG05911.1
Experimental_infoExpr_patternExpr1055370
Microarray_resultsGPL8303_CB6_WBGene00028269_A
GPL14143_CBG05911_988-1047_0.870_34_C
GPL14143_CBG05911_1211-1270_0.866_36_B
GPL14143_CBG05911_1516-1575_0.884_21_A
MethodGene