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WormBase Tree Display for Gene: WBGene00027962

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Name Class

WBGene00027962SMapS_parentSequencecb25.fpc0110
IdentityVersion1
NameCGC_nameCbr-cpg-20From_analysisInferred_from_orthology
Sequence_nameCBG05527
Molecular_nameCBG05527
CBG05527.1
CBP47941
Other_nameCBG_05527Accession_evidenceNDBHE601369
Public_nameCBG05527
DB_infoDatabaseNDBlocus_tagCBG_05527
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
228 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-cpg-20
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpg
RNASeq_FPKMWBls:00000020.263338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.442267From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.545635From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.931299From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.686783From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.788536From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.51724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000313.8841From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
23.3236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.44467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
11.0763From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.46074From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000473.484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
76.2383From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
78.9925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
67.9814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
73.661From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
75.096From_analysisRNASeq.briggsae.WBls:0000004.control_mean
81.3611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.169185From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.507554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.253777From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.299961From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.692289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.579861From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.376387From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.393647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.430234From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.466821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.64508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.388002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.455101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.522501From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.581668From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.5899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.89367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.456569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.523234From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.590986From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.762675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.182833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.325321From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.447465From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.493537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.502772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.086664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.285545From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.315149From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001010.466821From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.55953From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.505163From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.1107From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (15)
ParalogWBGene00029451Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033327Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035232Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035908Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036610Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036634Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Peptidase M12B, propeptide and Reprolysin family propeptide. Is an ortholog of C. elegans cpg-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05527
Corresponding_CDS_historyCBG05527:bp258
Corresponding_transcriptCBG05527.1
Other_sequenceMCC01135_1
Experimental_infoExpr_patternExpr1069502
Microarray_resultsGPL8303_CB6_WBGene00027962_A
GPL8303_CB6_WBGene00027962_B
GPL8303_CB6_WBGene00027962_C
GPL8303_CB6_WBGene00027962_D
GPL8303_CB6_WBGene00027962_E
GPL14143_CBG05527_84-143_0.915_9_C
GPL14143_CBG05527_202-261_0.923_6_B
GPL14143_CBG05527_478-537_0.879_28_A
MethodGene