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WormBase Tree Display for Gene: WBGene00027937

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Name Class

WBGene00027937SMapS_parentSequencecb25.fpc0110
IdentityVersion2
NameSequence_nameCBG05497
Molecular_nameCBG05497a
CBG05497a.1
CBP42053
CBG05497b
CBP39394
CBG05497b.1
Other_nameCBG_05497Accession_evidenceNDBHE601369
Public_nameCBG05497
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
231 Aug 2016 10:30:13WBPerson4025EventSplit_intoWBGene00270612
Split_intoWBGene00270612
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.61743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.98681From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.90988From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.12541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.30212From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.25191From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.042154From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.084307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.028102From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.061946From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.30973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.617173From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.02528From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.45867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.51778From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.53792From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.99528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.9211From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.05748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.38182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.10987From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.80117From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.83792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.92745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.41785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.3632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.45648From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.57704From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.79089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.25397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.8789From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.02243From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.63608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.81142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000633.70337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.1824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.76124From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.19659From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.32167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
8.01425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.76738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.47182From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.79172From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.98681From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.16847From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.77913From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.80746From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (15)
ParalogWBGene00027926Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027935Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027936Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027939Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027941Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027942Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028546Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042938Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00303120Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Protein of unknown function (DUF272) and Protein of unknown function DUF272. Is an ortholog of C. elegans C49A9.1 and C49A9.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05497a
CBG05497b
Corresponding_CDS_historyCBG05497:bp194
CBG05497:bp255
Corresponding_transcriptCBG05497a.1
CBG05497b.1
Experimental_infoExpr_patternExpr1070096
Microarray_resultsGPL8303_CB6_WBGene00027937_A
GPL8303_CB6_WBGene00027937_B
GPL14143_CBG05497_877-936_0.940_1_A
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
MethodGene