WormBase Tree Display for Gene: WBGene00027858

WBGene00027858 SMap: S_parent: Sequence: cb25.fpc0110
  Identity: Version: 4
    Name: Sequence_name: CBG05403
      Molecular_name: CBG05403
        CBG05403.1
        CBP01383
      Other_name: CBG_05403 Accession_evidence: NDB HE601369
      Public_name: CBG05403
    DB_info: Database: NDB locus_tag CBG_05403
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:57 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 21 Apr 2008 17:10:51 WBPerson2970 Name_change: CGC_name: Cbr-nspb-2
        3 12 Jan 2017 16:33:20 WBPerson4025 Event: Split_into: WBGene00271439
        4 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
      Split_into: WBGene00271439
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 1.1025 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        11.721 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        6.58968 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        6.94555 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.801831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        4.02402 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.14272 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.434681 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.869362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.289787 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (11)
      WBls:0000027 0.642292 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        10.5158 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        15.7065 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        8.95486 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        13.1111 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        168.86 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        48.9311 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 0.879857 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 23.3975 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        27.9675 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        29.9609 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        32.5375 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        5.17217 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        58.7366 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.762755 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.788838 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.819221 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.875688 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.51691 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.377827 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.631141 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.694053 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.696948 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 19.0398 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        22.0245 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        22.044 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        29.2071 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        29.8514 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        56.9417 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.75625 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        22.0343 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        25.0022 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 11.188 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        1.51691 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.872525 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        13.0494 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (39)
    Paralog: WBGene00027857 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00271622 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1459) and Protein of unknown function DUF1459. Is an ortholog of C. elegans nspb-1 and nspb-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG05403
    Corresponding_CDS_history: CBG05403:bp257
    Corresponding_transcript: CBG05403.1
  Experimental_info: Expr_pattern: Expr1064429
    Microarray_results: GPL14143_CBG05403_3-62_0.872_3_A
  Remark: [180319 gw3] The CGC name Cbr-nspb-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene