WormBase Tree Display for Gene: WBGene00027626

WBGene00027626 SMap: S_parent: Sequence: cb25.fpc0091a
  Identity: Version: 3
    Name: CGC_name: Cbr-ttr-36 From_analysis: Inferred_from_orthology
      Sequence_name: CBG05087
      Molecular_name: CBG05087
        CBG05087.1
        CBP45382
      Other_name: CBG_05087 Accession_evidence: NDB HE600917
      Public_name: Cbr-ttr-36
    DB_info: Database: NDB locus_tag CBG_05087
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:57 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 21 Apr 2008 17:10:52 WBPerson2970 Name_change: CGC_name: Cbr-ttr-36
        3 31 Aug 2016 10:30:13 WBPerson4025 Event: Split_into: WBGene00270770
      Split_into: WBGene00270770
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    RNASeq_FPKM: WBls:0000002 140.138 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        49.9362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        55.5058 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        81.86 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        128.425 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        91.9654 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        93.5013 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        3.4504 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        6.90079 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        5.39289 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        9.27788 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 50.858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        52.3013 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        53.7445 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        43.6525 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        57.3427 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        62.6294 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        75.829 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 1.8569 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        24.2626 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.33621 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        66.5948 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        28.4146 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        31.3202 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        52.4929 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 36.6665 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 16.4465 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        31.8614 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        46.2012 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        47.9804 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        64.0993 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        72.3978 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 36.3291 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        36.838 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        40.0911 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        43.3443 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        49.7147 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        82.3475 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        100.634 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        62.8459 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        65.1563 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        91.4447 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        27.0365 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        30.8388 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        32.9583 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        36.0415 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        70.8747 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        33.4402 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        36.1199 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        51.9282 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 43.3443 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        43.5889 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        49.484 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        51.0341 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00131096
    Ortholog (27)
    Paralog (49)
    Structured_description: Automated_description: Predicted to be located in cell surface. Is an ortholog of C. elegans ttr-36. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG05087
    Corresponding_transcript: CBG05087.1
    Other_sequence (15)
  Experimental_info: Expr_pattern: Expr1065416
    Microarray_results: GPL14143_CBG05087_54-113_0.850_4_B
      GPL14143_CBG05087_223-282_0.860_2_C
      GPL14143_CBG05087_324-383_0.871_1_A
  Method: Gene