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WormBase Tree Display for Gene: WBGene00026178

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Name Class

WBGene00026178SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-ptc-1From_analysisInferred_from_orthology
Sequence_nameCBG03294
Molecular_nameCBG03294
CBG03294.1
CBP00884
Other_nameCBG_03294Accession_evidenceNDBHE601438
Public_nameCbr-ptc-1
DB_infoDatabaseNDBlocus_tagCBG_03294
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-ptc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classptc
RNASeq_FPKMWBls:000000247.6804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
80.9016From_analysisRNASeq.briggsae.WBls:0000002.control_mean
97.4745From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
97.55From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
103.478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
86.5457From_analysisRNASeq.briggsae.WBls:0000002.control_mean
97.5123From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000351.4018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
61.7116From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
72.0214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
67.3068From_analysisRNASeq.briggsae.WBls:0000003.control_mean
78.4972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000431.1315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
31.5413From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
31.9512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
30.6609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.363From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
33.5494From_analysisRNASeq.briggsae.WBls:0000004.control_mean
42.6403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002714.6362From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
27.0605From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.7416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
61.8037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
115.49From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
38.22From_analysisRNASeq.briggsae.WBls:0000027.control_median
49.1679From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003563.5935From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.1077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
34.9354From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
44.6911From_analysisRNASeq.briggsae.WBls:0000038.control_median
47.0499From_analysisRNASeq.briggsae.WBls:0000038.control_mean
54.4467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
82.7098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041183.31From_analysisRNASeq.briggsae.WBls:0000041.control_mean
204.035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
211.97From_analysisRNASeq.briggsae.WBls:0000041.control_median
219.905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
223.768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
85.5309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
107.572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
155.611From_analysisRNASeq.briggsae.WBls:0000041.control_mean
155.803From_analysisRNASeq.briggsae.WBls:0000041.control_median
92.8542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063103.367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
61.5416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
63.5708From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
66.0186From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
68.7896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
72.6575From_analysisRNASeq.briggsae.WBls:0000063.control_mean
67.4041From_analysisRNASeq.briggsae.WBls:0000063.control_median
73.3742From_analysisRNASeq.briggsae.WBls:0000063.control_mean
76.9578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010163.5935From_analysisRNASeq.briggsae.total_over_all_stages.control_median
74.4193From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
65.424From_analysisRNASeq.briggsae.total_over_all_stages.control_median
74.6756From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129647
Ortholog (36)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans ptc-1. In C. elegans, ptc-1 is involved in molting cycle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03294
Corresponding_CDS_historyCBG03294:bp194
CBG03294:bp256
Corresponding_transcriptCBG03294.1
Other_sequence (31)
Experimental_infoExpr_patternExpr1062621
Microarray_resultsGPL8303_CB6_WBGene00026178_A
GPL8303_CB6_WBGene00026178_B
GPL8303_CB6_WBGene00026178_C
GPL14143_CBG03294_2957-3016_0.802_13_B
GPL14143_CBG03294_3061-3120_0.797_25_A
GPL14143_CBG03294_3499-3558_0.784_56_C
MethodGene