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WormBase Tree Display for Gene: WBGene00026022

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Name Class

WBGene00026022SMapS_parentSequencecb25.fpc0058
IdentityVersion3
NameCGC_nameCbr-myrf-1From_analysisInferred_from_orthology
Sequence_nameCBG03089
Molecular_nameCBG03089
CBG03089.1
CBP46351
Other_nameCBG_03089Accession_evidenceNDBHE601438
Cbr-pqn-47From_analysisInferred_from_orthology
Public_nameCbr-myrf-1
DB_infoDatabaseNDBlocus_tagCBG_03089
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-pqn-47
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-myrf-1
Other_nameCbr-pqn-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmyrf
RNASeq_FPKMWBls:000000222.4From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
38.3145From_analysisRNASeq.briggsae.WBls:0000002.control_mean
43.6698From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
48.8737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.8982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
32.2104From_analysisRNASeq.briggsae.WBls:0000002.control_mean
33.0349From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000033.28958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
5.03345From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.77733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
5.55382From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.59456From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000439.6134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
40.7944From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
41.9754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
39.431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
40.8104From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
41.7517From_analysisRNASeq.briggsae.WBls:0000004.control_mean
46.9282From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002710.108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
23.4748From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
39.5168From_analysisRNASeq.briggsae.WBls:0000027.control_mean
84.9676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
29.4133From_analysisRNASeq.briggsae.WBls:0000027.control_median
35.3518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
38.4756From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035240.162From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003841.8806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
51.4948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
55.395From_analysisRNASeq.briggsae.WBls:0000038.control_median
58.519From_analysisRNASeq.briggsae.WBls:0000038.control_mean
59.2951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
81.4056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004111.7044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.3423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.95164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.02801From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.10439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.02568From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.63452From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.16465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.2985From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.52361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000632.99367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.56535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.33124From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.52405From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.55672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.17325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.73755From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.94398From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.80509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010123.4748From_analysisRNASeq.briggsae.total_over_all_stages.control_median
39.4601From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
22.9374From_analysisRNASeq.briggsae.total_over_all_stages.control_median
35.3908From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129468
00129469
00129470
00129471
Ortholog (35)
ParalogWBGene00036891Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in protein autoprocessing and regulation of DNA-templated transcription. Is an ortholog of C. elegans myrf-1. In C. elegans, myrf-1 is involved in ecdysis, collagen and cuticulin-based cuticle and nematode larval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03089
Corresponding_CDS_historyCBG03089:bp194
CBG03089:bp255
Corresponding_transcriptCBG03089.1
Other_sequence (19)
Experimental_infoExpr_patternExpr1059362
Microarray_resultsGPL8303_CB6_WBGene00026022_A
GPL14143_CBG03089_1387-1446_0.780_50_C
GPL14143_CBG03089_1791-1850_0.810_1_A
GPL14143_CBG03089_1925-1984_0.492_465_B
MethodGene