WormBase Tree Display for Gene: WBGene00025553

WBGene00025553 SMap: S_parent: Sequence: cb25.fpc0058
  Identity: Version: 2
    Name: CGC_name: Cbr-gtap-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG02510
      Molecular_name: CBG02510
        CBG02510.1
        CBP38903
      Other_name: CBG_02510 Accession_evidence: NDB HE601438
        CBG_02513
      Public_name: CBG02510
    DB_info: Database: NDB locus_tag CBG_02510
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:55 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 31 Aug 2016 10:29:43 WBPerson4025 Event: Acquires_merge: WBGene00025556
        3 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbr-gtap-1
      Acquires_merge: WBGene00025556
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gtap
    RNASeq_FPKM: WBls:0000002 15.8958 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        21.6517 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        21.7122 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        27.5892 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        23.9664 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        24.6204 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        30.7287 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 42.4319 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        42.9742 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        43.5165 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        40.8257 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        42.258 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 32.7613 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        33.9211 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        35.0809 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        30.4203 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        34.1137 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        34.648 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        37.6582 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.463928 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        17.2905 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.86153 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        6.53865 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.48625 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        6.68173 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        7.11096 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 10.822 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.2852 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        13.4098 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        13.8833 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        29.8937 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        3.0691 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        9.1607 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 25.5968 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        39.4986 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        43.5893 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        43.8531 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        44.1168 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        44.6917 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        30.4545 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        31.3063 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        36.6259 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        37.4478 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 19.6182 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        21.2022 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        24.9691 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        25.5942 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        25.9837 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        38.5346 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        22.6145 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        23.7918 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        25.4221 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 21.2022 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        22.0761 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        23.8414 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        25.2817 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    Ortholog (38)
    Structured_description: Automated_description: Is an ortholog of C. elegans gtap-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG02510
    Corresponding_CDS_history: CBG02510:bp194
      CBG02510:bp255
    Corresponding_transcript: CBG02510.1
    Other_sequence: CBC12415_1
      CBC03666_1
      CJC03839_1
      CRC10531_1
      CR11757
      BXC07815_1
      CJC05622_1
  Experimental_info: Expr_pattern: Expr1057717
      Expr1069184
    Microarray_results: GPL8303_CB6_WBGene00025553_A
      GPL8303_CB6_WBGene00025553_B
      GPL8303_CB6_WBGene00025556_A
      GPL8303_CB6_WBGene00025556_C
      GPL14143_CBG02510_609-668_0.833_8_B
      GPL14143_CBG02510_704-763_0.827_14_C
      GPL14143_CBG02510_916-975_0.779_44_A
      GPL14143_CBG02513_787-846_0.883_1_A
  Method: Gene