WormBase Tree Display for Gene: WBGene00022888
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WBGene00022888 | SMap | S_parent | Sequence | ZK1290 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | rnh | |||||
Allele (32) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00055210 | |||||
00055211 | ||||||
00055212 | ||||||
00126851 | ||||||
00126852 | ||||||
Ortholog (31) | ||||||
Paralog | WBGene00004382 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00007303 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00010787 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00011664 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Concise_description | rnh-1.1 is one of four C. elegans genes that can encode an RNase H ribonuclease; when expressed in vitro, RNH-1.1 exhibits RNase H activity; rnh-1.1 transcripts are expressed from the L3 larval stage through adulthood. | Paper_evidence | WBPaper00027023 | ||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 25 Feb 2014 00:00:00 | |||||
Automated_description | Enables RNA-DNA hybrid ribonuclease activity. Predicted to be involved in DNA replication, removal of RNA primer. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | ZK1290.6 | ||||
Corresponding_CDS_history | ZK1290.6a:wp112 | |||||
ZK1290.6b:wp114 | ||||||
Corresponding_transcript | ZK1290.6.1 | |||||
Other_sequence | Oden_isotig14869 | |||||
EX547816.1 | ||||||
Dviv_isotig23460 | ||||||
Oden_isotig14868 | ||||||
ACC19014_1 | ||||||
Tcol_isotig14970 | ||||||
Acan_isotig02642 | ||||||
Associated_feature | WBsf221600 | |||||
Experimental_info | RNAi_result | WBRNAi00059215 | Inferred_automatically | RNAi_primary | ||
WBRNAi00038196 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00021868 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00002023 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1011029 | |||||
Expr1162634 | ||||||
Expr2015386 | ||||||
Expr2033620 | ||||||
Drives_construct | WBCnstr00023892 | |||||
Construct_product | WBCnstr00023892 | |||||
Microarray_results (18) | ||||||
Expression_cluster (159) | ||||||
Interaction | WBInteraction000323076 | |||||
WBInteraction000401810 | ||||||
Map_info (3) | ||||||
Reference | WBPaper00005577 | |||||
WBPaper00027023 | ||||||
Remark | ZK1290.6 published as rnh-1.2 | Paper_evidence | WBPaper00005577 | |||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |