WormBase Tree Display for Gene: WBGene00022803
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| WBGene00022803 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | ZK688.9 | |||||||
| Molecular_name | ZK688.9 | ||||||||
| ZK688.9.1 | |||||||||
| CE40006 | |||||||||
| Other_name | CELE_ZK688.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ZK688.9 | ||||||||
| DB_info | Database | AceView | gene | 3I972 | |||||
| WormQTL | gene | WBGene00022803 | |||||||
| WormFlux | gene | WBGene00022803 | |||||||
| NDB | locus_tag | CELE_ZK688.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022803|UniProtKB=P34274 | |||||||
| family | PTHR21021 | ||||||||
| NCBI | gene | 176106 | |||||||
| RefSeq | protein | NM_066312.8 | |||||||
| SwissProt | UniProtAcc | P34274 | |||||||
| TREEFAM | TREEFAM_ID | TF105943 | |||||||
| UniProt_GCRP | UniProtAcc | P34274 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 Feb 2006 13:44:59 | WBPerson1867 | Event | Split_into | WBGene00044762 | ||||
| Split_into | WBGene00044762 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (32) | |||||||||
| Strain | WBStrain00051659 | ||||||||
| WBStrain00051679 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00041240 | ||||||||
| 00041241 | |||||||||
| 00126778 | |||||||||
| Contained_in_operon | CEOP3462 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Concise_description | ZK688.9 encodes the C. elegans ortholog of TIP41, a protein first identified in Saccharomyces cerevisiae that physically interacts with and negatively regulates activity of TAP42, a protein phosphatase 2A regulatory subunit; ZK688.9(RNAi) in wild-type animals results in fertility defects in F1 hermaphrodites, who exhibit a 80-90% decrease in the total number of eggs laid, and ~80% embryonic lethality in the F2 generation. | Paper_evidence | WBPaper00005456 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 30 Jul 2008 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in TOR signaling. Predicted to be located in cytosol. Is an ortholog of human TIPRL (TOR signaling pathway regulator). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK688.9 | |||||||
| Corresponding_CDS_history | ZK688.9:wp149 | ||||||||
| ZK688.9:wp155 | |||||||||
| Corresponding_transcript | ZK688.9.1 | ||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf667112 | ||||||||
| WBsf993184 | |||||||||
| WBsf1015331 | |||||||||
| WBsf1015332 | |||||||||
| WBsf1015333 | |||||||||
| WBsf227042 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028337 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005466 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023009 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008323 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059679 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062067 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020828 | ||||||||
| Expr1040090 | |||||||||
| Expr1163092 | |||||||||
| Expr2008945 | |||||||||
| Expr2027181 | |||||||||
| Drives_construct | WBCnstr00023961 | ||||||||
| Construct_product | WBCnstr00023961 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Positive | Positive_clone | ZK688 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.512123 | |||||||
| Reference | WBPaper00005456 | ||||||||
| WBPaper00027281 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
