WormBase Tree Display for Gene: WBGene00022721
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| WBGene00022721 | SMap | S_parent | Sequence | ZK370 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ugtp-1 | Person_evidence | WBPerson610 | |||||
| Sequence_name | ZK370.7 | ||||||||
| Molecular_name | ZK370.7 | ||||||||
| ZK370.7.1 | |||||||||
| CE29642 | |||||||||
| ZK370.7.2 | |||||||||
| Other_name | CELE_ZK370.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ugtp-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 May 2007 10:33:07 | WBPerson2970 | Name_change | CGC_name | ugtp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ugtp | ||||||||
| Allele (70) | |||||||||
| Strain | WBStrain00037562 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00052083 | ||||||||
| 00052084 | |||||||||
| 00052085 | |||||||||
| 00052086 | |||||||||
| 00052087 | |||||||||
| 00126719 | |||||||||
| 00126720 | |||||||||
| 00126721 | |||||||||
| 00126722 | |||||||||
| Contained_in_operon | CEOP3539 | ||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00005153 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00014139 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015038 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015404 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018414 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019451 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022577 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | ugtp-1 encodes a nucleotide sugar transporter; UGTP-1 is predicted to transport UDP-galactose; a UGTP-1::GFP fusion protein is present in the cytoplasm in a punctate pattern and also seen on cortical granules in oocytes and briefly in newly fertilized embryos. | Paper_evidence | WBPaper00031064 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 03 Nov 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable pyrimidine nucleotide-sugar transmembrane transporter activity. Predicted to be involved in carbohydrate transport and pyrimidine nucleotide-sugar transmembrane transport. Located in Golgi medial cisterna and cortical granule. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIf. Is an ortholog of human SLC35A1 (solute carrier family 35 member A1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070258 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11021) | ||||
| Molecular_info | Corresponding_CDS | ZK370.7 | |||||||
| Corresponding_transcript | ZK370.7.1 | ||||||||
| ZK370.7.2 | |||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf651300 | ||||||||
| WBsf993449 | |||||||||
| WBsf227182 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033586 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021980 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005479 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097936 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027661 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005684 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059381 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021982 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059380 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4891 | ||||||||
| Expr1027073 | |||||||||
| Expr1040045 | |||||||||
| Expr1162809 | |||||||||
| Expr2017818 | |||||||||
| Expr2035955 | |||||||||
| Drives_construct | WBCnstr00024026 | ||||||||
| Construct_product | WBCnstr00001389 | ||||||||
| WBCnstr00024026 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction | WBInteraction000399719 | ||||||||
| WBInteraction000399720 | |||||||||
| WBInteraction000399721 | |||||||||
| WBInteraction000443159 | |||||||||
| WBInteraction000470914 | |||||||||
| WBInteraction000470915 | |||||||||
| Map_info | Map | III | Position | -0.076234 | Error | 0.001919 | |||
| Positive | Positive_clone | ZK370 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031064 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056598 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
