WormBase Tree Display for Gene: WBGene00022390
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WBGene00022390 | SMap | S_parent | Sequence | Y95B8A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | him-19 | Paper_evidence | WBPaper00035595 | |||||
Person_evidence | WBPerson261 | ||||||||
Sequence_name | Y95B8A.11 | ||||||||
Molecular_name | Y95B8A.11a | ||||||||
Y95B8A.11a.1 | |||||||||
CE41964 | |||||||||
Y95B8A.11b | |||||||||
CE49212 | |||||||||
Y95B8A.11c | |||||||||
CE49423 | |||||||||
Y95B8A.11b.1 | |||||||||
Y95B8A.11c.1 | |||||||||
Other_name | CELE_Y95B8A.11 | Accession_evidence | NDB | BX284601 | |||||
Public_name | him-19 | ||||||||
DB_info | Database | AceView | gene | 1B354 | |||||
WormQTL | gene | WBGene00022390 | |||||||
WormFlux | gene | WBGene00022390 | |||||||
NDB | locus_tag | CELE_Y95B8A.11 | |||||||
NCBI | gene | 190809 | |||||||
RefSeq | protein | NM_058388.5 | |||||||
NM_001306262.2 | |||||||||
NM_001306263.3 | |||||||||
TrEMBL | UniProtAcc | V6CK14 | |||||||
V6CLF9 | |||||||||
Q9N2V7 | |||||||||
UniProt_GCRP | UniProtAcc | Q9N2V7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 04 Feb 2010 11:37:06 | WBPerson2970 | Name_change | CGC_name | him-19 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | him | ||||||||
Allele (117) | |||||||||
Strain | WBStrain00035461 | ||||||||
WBStrain00035462 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00093308 | ||||||||
00093309 | |||||||||
Ortholog (20) | |||||||||
Structured_description | Concise_description | him-19 encodes a novel protein conserved amongst nematodes that has some similarity to members of the DDX6 DEAD/H-box RNA helicase family; during meiosis, him-19 is required for proper homologue recognition, recombination, and synaptonemal complex formation with a greater requirement seen in the female versus male germ line as well as in older animals. | Paper_evidence | WBPaper00035595 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 03 May 2010 00:00:00 | ||||||||
Automated_description | Involved in meiotic DNA double-strand break formation and regulation of synaptonemal complex assembly. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y95B8A.11a | |||||||
Y95B8A.11b | |||||||||
Y95B8A.11c | |||||||||
Corresponding_CDS_history | Y95B8A.11:wp102 | ||||||||
Y95B8A.11:wp175 | |||||||||
Y95B8A.11:wp185 | |||||||||
Corresponding_transcript | Y95B8A.11a.1 | ||||||||
Y95B8A.11b.1 | |||||||||
Y95B8A.11c.1 | |||||||||
Other_sequence | CJC08775_1 | ||||||||
Associated_feature | WBsf648918 | ||||||||
WBsf982616 | |||||||||
WBsf982617 | |||||||||
WBsf1009158 | |||||||||
WBsf218940 | |||||||||
WBsf218941 | |||||||||
Experimental_info | RNAi_result | WBRNAi00082472 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004856 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058664 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037922 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014735 | ||||||||
Expr1162085 | |||||||||
Expr2012426 | |||||||||
Expr2030662 | |||||||||
Microarray_results (22) | |||||||||
Expression_cluster (115) | |||||||||
Interaction | WBInteraction000578932 | ||||||||
Map_info | Map | I | Position | -17.9394 | Error | 0.057516 | |||
Positive | Positive_clone | Y95B8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035595 | ||||||||
WBPaper00037842 | |||||||||
WBPaper00062498 | |||||||||
WBPaper00064333 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |