WormBase Tree Display for Gene: WBGene00022051

WBGene00022051 SMap: S_parent: Sequence: Y67D2
  Identity: Version: 2
    Name: CGC_name: rep-1 Person_evidence: WBPerson919
      Sequence_name: Y67D2.1
      Molecular_name: Y67D2.1
        Y67D2.1.1
        CE27306
        Y67D2.1.2
      Other_name: CELE_Y67D2.1 Accession_evidence: NDB BX284603
      Public_name: rep-1
    DB_info: Database: AceView gene 3C665
        WormQTL gene WBGene00022051
        WormFlux gene WBGene00022051
        NDB locus_tag CELE_Y67D2.1
        Panther gene CAEEL|WormBase=WBGene00022051|UniProtKB=Q9BKQ5
          family PTHR11787
        NCBI gene 175311
        RefSeq protein NM_001027757.6
        SwissProt UniProtAcc Q9BKQ5
        UniProt_GCRP UniProtAcc Q9BKQ5
        OMIM gene 300390
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Aug 2008 12:04:36 WBPerson2970 Name_change: CGC_name: rep-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rep
    Allele (193)
    Strain: WBStrain00029073
      WBStrain00029076
      WBStrain00033086
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOP3064
    Ortholog (36)
    Paralog: WBGene00001558 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTPase activator activity and Rab GDP-dissociation inhibitor activity. Predicted to be involved in vesicle-mediated transport. Predicted to be located in cytosol and nucleus. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Expressed in alimentary muscle; body wall musculature; hypodermis; and neurons. Human ortholog(s) of this gene implicated in asthma and choroideremia. Is an ortholog of human CHM (CHM Rab escort protein) and CHML (CHM like Rab escort protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:9821 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:1940)
      DOID:2841 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:1941)
  Molecular_info: Corresponding_CDS: Y67D2.1
    Corresponding_CDS_history: Y67D2.1b:wp271
    Corresponding_transcript: Y67D2.1.1
      Y67D2.1.2
    Other_sequence (27)
    Associated_feature: WBsf991324
      WBsf991325
      WBsf991326
      WBsf991327
      WBsf1014253
      WBsf1014254
      WBsf1014255
      WBsf1014256
      WBsf224460
      WBsf224461
  Experimental_info: RNAi_result: WBRNAi00057977 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8970
      Expr1011865
      Expr1039697
      Expr1161405
      Expr2015297
      Expr2033531
    Drives_construct: WBCnstr00013644
    Microarray_results (25)
    Expression_cluster (70)
    Interaction (19)
  Map_info: Map: III Position: -21.1111 Error: 0.323742
    Positive: Positive_clone: Y67D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00032402
    WBPaper00038491
    WBPaper00041771
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene