WormBase Tree Display for Gene: WBGene00021714
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| WBGene00021714 | SMap | S_parent | Sequence | Y49F6B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cyh-1 | Person_evidence | WBPerson1711 | |||||
| Sequence_name | Y49F6B.1 | ||||||||
| Molecular_name (18) | |||||||||
| Other_name | Y49F6B_108.i | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y49F6B.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | cyh-1 | ||||||||
| DB_info | Database | AceView | gene | 2D797 | |||||
| WormQTL | gene | WBGene00021714 | |||||||
| WormFlux | gene | WBGene00021714 | |||||||
| NDB | locus_tag | CELE_Y49F6B.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021714|UniProtKB=Q9N4U0 | |||||||
| family | PTHR10026 | ||||||||
| NCBI | gene | 190078 | |||||||
| RefSeq | protein | NM_001393043.1 | |||||||
| NM_001393041.1 | |||||||||
| NM_001393044.1 | |||||||||
| NM_001393042.1 | |||||||||
| NM_001393040.1 | |||||||||
| NM_062163.5 | |||||||||
| TrEMBL | UniProtAcc | Q9N4U0 | |||||||
| A0A7R9XND1 | |||||||||
| A0A7R9SUL6 | |||||||||
| A0A7R9SW78 | |||||||||
| A0A7R9SUI7 | |||||||||
| A0A7R9SUM0 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A7R9SUL6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Apr 2005 11:05:24 | WBPerson2970 | Name_change | CGC_name | cyh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cyh | ||||||||
| Allele (117) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00125965 | ||||||||
| 00125966 | |||||||||
| Contained_in_operon | CEOP2108 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00000506 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000507 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000508 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000876 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009650 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49F6B.1a | |||||||
| Y49F6B.1b | |||||||||
| Y49F6B.1c | |||||||||
| Y49F6B.1d | |||||||||
| Y49F6B.1e | |||||||||
| Y49F6B.1f | |||||||||
| Corresponding_CDS_history | Y49F6B.1:wp112 | ||||||||
| Corresponding_transcript | Y49F6B.1a.1 | ||||||||
| Y49F6B.1b.1 | |||||||||
| Y49F6B.1c.1 | |||||||||
| Y49F6B.1d.1 | |||||||||
| Y49F6B.1e.1 | |||||||||
| Y49F6B.1f.1 | |||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf987269 | ||||||||
| WBsf221021 | |||||||||
| WBsf221022 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00106665 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057034 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026792 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009365 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106613 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037301 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020250 | ||||||||
| Expr1039511 | |||||||||
| Expr1160475 | |||||||||
| Expr2010655 | |||||||||
| Expr2028895 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (85) | |||||||||
| SAGE_tag | SAGE:ctcagggcaa | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| Interaction (113) | |||||||||
| Map_info | Map | II | Position | -6.24909 | Error | 0.00065 | |||
| Positive | Positive_clone | Y49F6B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028806 | ||||||||
| WBPaper00029038 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062203 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
