WormBase Tree Display for Gene: WBGene00021686
expand all nodes | collapse all nodes | view schema
| WBGene00021686 | SMap | S_parent | Sequence | Y48G8AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nsun-2 | Person_evidence | WBPerson1719 | |||||
| Sequence_name | Y48G8AL.5 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_Y48G8AL.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nsun-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 06 Feb 2019 16:53:25 | WBPerson1983 | Name_change | CGC_name | nsun-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nsun | ||||||||
| Allele (574) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Contained_in_operon | CEOP1017 | ||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00021476 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables tRNA (cytosine-5-)-methyltransferase activity. Predicted to be involved in tRNA methylation. Predicted to be located in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 5. Is an ortholog of human NSUN2 (NOP2/Sun RNA methyltransferase 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081181 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25994) | ||||
| Molecular_info | Corresponding_CDS | Y48G8AL.5a | |||||||
| Y48G8AL.5b | |||||||||
| Y48G8AL.5c | |||||||||
| Y48G8AL.5d | |||||||||
| Corresponding_CDS_history | Y48G8AL.5:wp234 | ||||||||
| Corresponding_transcript | Y48G8AL.5a.1 | ||||||||
| Y48G8AL.5b.1 | |||||||||
| Y48G8AL.5c.1 | |||||||||
| Y48G8AL.5d.1 | |||||||||
| Other_sequence (62) | |||||||||
| Associated_feature | WBsf655761 | ||||||||
| WBsf1009198 | |||||||||
| WBsf217196 | |||||||||
| WBsf217197 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056968 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056966 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026772 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117108 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026771 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056967 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020760 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026770 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056969 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023068 | ||||||||
| Expr1039499 | |||||||||
| Expr1160417 | |||||||||
| Expr2007698 | |||||||||
| Expr2025940 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (85) | |||||||||
| Interaction (164) | |||||||||
| Map_info | Map | I | Position | -16.6423 | |||||
| Positive | Positive_clone | Y48G8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00054284 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060738 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
