WormBase Tree Display for Gene: WBGene00021564
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| WBGene00021564 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y45G12B.3 | |||||||
| Molecular_name | Y45G12B.3a | ||||||||
| Y45G12B.3a.1 | |||||||||
| CE28366 | |||||||||
| Y45G12B.3b | |||||||||
| CE51068 | |||||||||
| Y45G12B.3a.2 | |||||||||
| Y45G12B.3b.1 | |||||||||
| Other_name | CELE_Y45G12B.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y45G12B.3 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (250) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001728 | ||||||||
| 00001729 | |||||||||
| 00094997 | |||||||||
| 00094998 | |||||||||
| 00094999 | |||||||||
| 00095000 | |||||||||
| 00095001 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00009503 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00010847 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013718 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015250 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015251 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017765 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021355 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable 2-hydroxyglutarate dehydrogenase activity. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in brain disease (multiple) and hereditary spastic paraplegia. Is an ortholog of human L2HGDH (L-2-hydroxyglutarate dehydrogenase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050753 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20499) | ||||
| DOID:11832 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20499) | ||||||
| DOID:2476 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20499) | ||||||
| DOID:0050574 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20499) | ||||||
| DOID:0050573 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20499) | ||||||
| Molecular_info | Corresponding_CDS | Y45G12B.3a | |||||||
| Y45G12B.3b | |||||||||
| Corresponding_transcript | Y45G12B.3a.1 | ||||||||
| Y45G12B.3a.2 | |||||||||
| Y45G12B.3b.1 | |||||||||
| Other_sequence (120) | |||||||||
| Associated_feature | WBsf652511 | ||||||||
| WBsf652512 | |||||||||
| WBsf668799 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056621 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056620 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020617 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037107 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011599 | ||||||||
| Expr1039442 | |||||||||
| Expr1160085 | |||||||||
| Expr2007560 | |||||||||
| Expr2025796 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (49) | |||||||||
| Map_info | Positive | Positive_clone | Y45G12B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -13.3265 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Method | Gene |
