WormBase Tree Display for Gene: WBGene00021560
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WBGene00021560 | SMap | S_parent | Sequence | Y45G5AM | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | coh-4 | Person_evidence | WBPerson574 | |||
Sequence_name | Y45G5AM.8 | ||||||
Molecular_name | Y45G5AM.8a | ||||||
Y45G5AM.8a.1 | |||||||
CE27409 | |||||||
Y45G5AM.8b | |||||||
CE51569 | |||||||
Y45G5AM.8c | |||||||
CE51556 | |||||||
Y45G5AM.8b.1 | |||||||
Y45G5AM.8c.1 | |||||||
Other_name | CELE_Y45G5AM.8 | Accession_evidence | NDB | BX284605 | |||
Public_name | coh-4 | ||||||
DB_info | Database | AceView | gene | 5E652 | |||
WormQTL | gene | WBGene00021560 | |||||
WormFlux | gene | WBGene00021560 | |||||
NDB | locus_tag | CELE_Y45G5AM.8 | |||||
NCBI | gene | 178818 | |||||
RefSeq | protein | NM_001330833.3 | |||||
NM_071760.3 | |||||||
NM_001330834.3 | |||||||
TrEMBL | UniProtAcc | A0A168HB71 | |||||
Q95XJ4 | |||||||
A0A163UTM2 | |||||||
UniProt_GCRP | UniProtAcc | Q95XJ4 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | coh | ||||||
Allele (163) | |||||||
Strain | WBStrain00035161 | ||||||
WBStrain00035162 | |||||||
WBStrain00035163 | |||||||
WBStrain00035164 | |||||||
WBStrain00055740 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00089042 | ||||||
Contained_in_operon | CEOP5562 | ||||||
Ortholog (20) | |||||||
Paralog | WBGene00000592 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
WormBase-Compara | |||||||
Structured_description | Concise_description | coh-4 encodes a member of the Rad21/Rec8-like family of cohesion proteins known as kleisins; COH-4, along with its paralogs REC-8 and COH-3, function as members of a meiotic cohesin complex that mediates sister chromatid cohesion. | Paper_evidence | WBPaper00034684 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 29 Nov 2010 00:00:00 | ||||||
Automated_description | Involved in meiotic sister chromatid cohesion. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y45G5AM.8a | |||||
Y45G5AM.8b | |||||||
Y45G5AM.8c | |||||||
Corresponding_transcript | Y45G5AM.8a.1 | ||||||
Y45G5AM.8b.1 | |||||||
Y45G5AM.8c.1 | |||||||
Associated_feature | WBsf668649 | ||||||
WBsf668856 | |||||||
WBsf668857 | |||||||
WBsf999747 | |||||||
WBsf999748 | |||||||
WBsf999749 | |||||||
WBsf1019467 | |||||||
WBsf233561 | |||||||
Experimental_info | RNAi_result | WBRNAi00056638 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr11961 | ||||||
Expr1039438 | |||||||
Expr1160110 | |||||||
Expr2010299 | |||||||
Expr2028541 | |||||||
Antibody | WBAntibody00002562 | ||||||
WBAntibody00002687 | |||||||
Microarray_results (12) | |||||||
Expression_cluster (94) | |||||||
Interaction | WBInteraction000554911 | ||||||
WBInteraction000560270 | |||||||
WBInteraction000583689 | |||||||
WBInteraction000584069 | |||||||
Map_info | Map | V | Position | -6.34419 | Error | 0.01466 | |
Positive | Positive_clone | Y45G5AM | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (15) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |