WormBase Tree Display for Gene: WBGene00021506
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WBGene00021506 | SMap | S_parent | Sequence | Y41D4A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y41D4A.4 | |||||||
Molecular_name (15) | |||||||||
Other_name | CELE_Y41D4A.4 | Accession_evidence | NDB | BX284604 | |||||
Public_name | Y41D4A.4 | ||||||||
DB_info | Database | AceView | gene | 4C515 | |||||
WormQTL | gene | WBGene00021506 | |||||||
WormFlux | gene | WBGene00021506 | |||||||
NDB | locus_tag | CELE_Y41D4A.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021506|UniProtKB=U4PRX8 | |||||||
family | PTHR10766 | ||||||||
NCBI | gene | 176983 | |||||||
RefSeq | protein | NM_067729.6 | |||||||
NM_001380063.1 | |||||||||
NM_001380061.2 | |||||||||
NM_001380064.1 | |||||||||
NM_001380062.2 | |||||||||
TrEMBL | UniProtAcc | Q95Y24 | |||||||
U4PBU4 | |||||||||
U4PML6 | |||||||||
U4PRX8 | |||||||||
U4PC73 | |||||||||
UniProt_GCRP | UniProtAcc | U4PRX8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (131) | |||||||||
Strain | WBStrain00002275 | ||||||||
WBStrain00002276 | |||||||||
WBStrain00002398 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (5) | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00006472 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00014119 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to be involved in protein localization to membrane. Predicted to be located in membrane. Expressed in head and tail. Is an ortholog of human TM9SF3 (transmembrane 9 superfamily member 3). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y41D4A.4a | |||||||
Y41D4A.4b | |||||||||
Y41D4A.4c | |||||||||
Y41D4A.4d | |||||||||
Y41D4A.4e | |||||||||
Corresponding_transcript | Y41D4A.4a.1 | ||||||||
Y41D4A.4b.1 | |||||||||
Y41D4A.4c.1 | |||||||||
Y41D4A.4d.1 | |||||||||
Y41D4A.4e.1 | |||||||||
Other_sequence (78) | |||||||||
Associated_feature | WBsf645817 | ||||||||
WBsf645818 | |||||||||
WBsf659927 | |||||||||
WBsf659928 | |||||||||
WBsf659929 | |||||||||
WBsf659930 | |||||||||
WBsf995521 | |||||||||
WBsf1016780 | |||||||||
WBsf227975 | |||||||||
Experimental_info | RNAi_result (2) | ||||||||
Expr_pattern | Chronogram487 | ||||||||
Chronogram855 | |||||||||
Chronogram1443 | |||||||||
Expr6963 | |||||||||
Expr6964 | |||||||||
Expr1014160 | |||||||||
Expr1039398 | |||||||||
Expr1159858 | |||||||||
Expr2007437 | |||||||||
Expr2025673 | |||||||||
Drives_construct | WBCnstr00002975 | ||||||||
WBCnstr00002976 | |||||||||
WBCnstr00004483 | |||||||||
Microarray_results (29) | |||||||||
Expression_cluster (103) | |||||||||
SAGE_tag | SAGE:tatccaaagt | Strand | Antisense | ||||||
SAGE:ggaatcttcg | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:accggcaccatcggata | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:agtccgagagcggcggc | Strand | Antisense | |||||||
SAGE:accggcacca | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction | WBInteraction000290719 | ||||||||
WBInteraction000581223 | |||||||||
Map_info | Positive | Positive_clone | Y41D4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | -16.0664 | |||||||
Reference | WBPaper00026601 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00061547 | |||||||||
Method | Gene |