WormBase Tree Display for Gene: WBGene00021423

WBGene00021423 SMap: S_parent: Sequence: Y38F2AR
  Identity: Version: 4
    Name: CGC_name: tftc-1 Person_evidence: WBPerson4025
      Sequence_name: Y38F2AR.5
      Molecular_name: Y38F2AR.5a
        Y38F2AR.5a.1
        CE48693
        Y38F2AR.5b
        CE48541
        Y38F2AR.5b.1
      Other_name: CELE_Y38F2AR.5 Accession_evidence: NDB BX284604
      Public_name: tftc-1
    DB_info: Database: AceView gene 4D139
        WormQTL gene WBGene00021423
        WormFlux gene WBGene00021423
        NDB locus_tag CELE_Y38F2AR.5
        Panther gene CAEEL|WormBase=WBGene00021423|UniProtKB=U4PBT1
          family PTHR15180
        NCBI gene 177024
        RefSeq protein NM_001307599.4
            NM_001307600.3
        TrEMBL UniProtAcc U4PC56
            U4PBT1
        UniProt_GCRP UniProtAcc U4PBT1
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Jul 2012 14:16:36 WBPerson2970 Name_change: CGC_name: tftc-1
        3 12 Sep 2013 15:57:43 WBPerson4025 Event: Acquires_merge: WBGene00021424
        4 12 Sep 2013 15:57:43 WBPerson4025 Event: Acquires_merge: WBGene00021431
      Acquires_merge: WBGene00021424
        WBGene00021431
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tftc
    Allele (875)
    RNASeq_FPKM (74)
    GO_annotation: 00104999
      00105000
      00105001
      00125786
      00125787
      00125788
    Contained_in_operon: CEOP4060
    Ortholog (36)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be involved in 5S class rRNA transcription by RNA polymerase III and transcription initiation at RNA polymerase III promoter. Predicted to be part of transcription factor TFIIIC complex. Is an ortholog of human GTF3C1 (general transcription factor IIIC subunit 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38F2AR.5a
      Y38F2AR.5b
    Corresponding_CDS_history: Y38F2AR.5:wp131
      Y38F2AR.5:wp231
      Y38F2AR.5:wp239
    Corresponding_transcript: Y38F2AR.5a.1
      Y38F2AR.5b.1
    Other_sequence (15)
    Associated_feature (11)
    Transcription_factor: WBTranscriptionFactor000249
      WBTranscriptionFactor000313
  Experimental_info: RNAi_result: WBRNAi00020304 Inferred_automatically: RNAi_primary
      WBRNAi00020303 Inferred_automatically: RNAi_primary
      WBRNAi00056053 Inferred_automatically: RNAi_primary
      WBRNAi00056051 Inferred_automatically: RNAi_primary
      WBRNAi00056049 Inferred_automatically: RNAi_primary
      WBRNAi00056052 Inferred_automatically: RNAi_primary
      WBRNAi00020305 Inferred_automatically: RNAi_primary
    Expr_pattern (11)
    Microarray_results (64)
    Expression_cluster (88)
    Interaction: WBInteraction000538923
      WBInteraction000575275
      WBInteraction000575502
  Map_info: Map: IV Position: -7.72709
    Positive: Positive_clone: Y38F2AR Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene