WormBase Tree Display for Gene: WBGene00021401
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WBGene00021401 | Evidence | Paper_evidence | WBPaper00006517 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y38C1AA | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | prdx | ||||||
Allele (26) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00084703 | ||||||
00084704 | |||||||
00084705 | |||||||
00084706 | |||||||
00084707 | |||||||
00084708 | |||||||
00084709 | |||||||
00125760 | |||||||
00125761 | |||||||
00125762 | |||||||
Contained_in_operon | CEOP4636 | ||||||
CEOP4007 | |||||||
Ortholog (36) | |||||||
Paralog | WBGene00006434 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00011110 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable peroxiredoxin activity. Predicted to be involved in cell redox homeostasis. Predicted to be located in cytosol and mitochondrion. Is an ortholog of human PRDX6 (peroxiredoxin 6). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y38C1AA.11 | |||||
Corresponding_transcript | Y38C1AA.11.1 | ||||||
Other_sequence (34) | |||||||
Associated_feature (5) | |||||||
Experimental_info | Expr_pattern | Expr1013926 | |||||
Expr1039348 | |||||||
Expr1159499 | |||||||
Expr2015089 | |||||||
Expr2033326 | |||||||
Antibody | WBAntibody00000737 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (100) | |||||||
Interaction (84) | |||||||
Map_info | Map | IV | Position | -26.8083 | Error | 0.006782 | |
Positive | Positive_clone | Y38C1AA | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00064988 | |||||||
WBPaper00065026 | |||||||
Remark | prdx-6 was previously incorrectly connected to Y38C1AA.1 (WBGene00021394) | Curator_confirmed | WBPerson2970 | ||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |