WormBase Tree Display for Gene: WBGene00021400
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WBGene00021400 | SMap | S_parent | Sequence | Y38C1AA | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | gegf-1 | Person_evidence | WBPerson260 | |||
Sequence_name | Y38C1AA.9 | ||||||
Molecular_name (3) | |||||||
Other_name | Y38C1AA.b | Curator_confirmed | WBPerson1983 | ||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
CELE_Y38C1AA.9 | Accession_evidence | NDB | BX284604 | ||||
Public_name | gegf-1 | ||||||
DB_info | Database | AceView | gene | 4A906 | |||
WormQTL | gene | WBGene00021400 | |||||
WormFlux | gene | WBGene00021400 | |||||
NDB | locus_tag | CELE_Y38C1AA.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00021400|UniProtKB=Q9N432 | |||||
family | PTHR24044 | ||||||
NCBI | gene | 189642 | |||||
RefSeq | protein | NM_067470.3 | |||||
TrEMBL | UniProtAcc | Q9N432 | |||||
UniProt_GCRP | UniProtAcc | Q9N432 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gegf | ||||||
Allele (22) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (28) | |||||||
Paralog | WBGene00000185 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00001148 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00001609 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00004963 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012917 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018041 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00019901 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Enriched in ABplpppppp; ABprpppppp; neuronal sheath cell; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by nine chemicals including rotenone; D-glucose; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: EGF-like domain and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y38C1AA.9 | |||||
Corresponding_transcript | Y38C1AA.9.1 | ||||||
Other_sequence (9) | |||||||
Associated_feature | WBsf995080 | ||||||
WBsf995081 | |||||||
WBsf1016499 | |||||||
WBsf1016500 | |||||||
WBsf229649 | |||||||
Experimental_info | RNAi_result | WBRNAi00036826 | Inferred_automatically | RNAi_primary | |||
WBRNAi00055991 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070197 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1021617 | ||||||
Expr1159509 | |||||||
Expr2007295 | |||||||
Expr2025528 | |||||||
Microarray_results (14) | |||||||
Expression_cluster (136) | |||||||
Map_info | Positive | Positive_clone | Y38C1AA | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | IV | -26.8853 | |||||
Method | Gene |