WormBase Tree Display for Gene: WBGene00021287
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| WBGene00021287 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y24D9B.1 | |||||||
| Molecular_name | Y24D9B.1 | ||||||||
| Y24D9B.1.1 | |||||||||
| CE31635 | |||||||||
| Other_name | Y24D9B.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y24D9B.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y24D9B.1 | ||||||||
| DB_info | Database | AceView | gene | 4F85 | |||||
| WormQTL | gene | WBGene00021287 | |||||||
| WormFlux | gene | WBGene00021287 | |||||||
| NDB | locus_tag | CELE_Y24D9B.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021287|UniProtKB=Q9TYQ2 | |||||||
| family | PTHR12876 | ||||||||
| NCBI | gene | 177197 | |||||||
| RefSeq | protein | NM_068139.5 | |||||||
| TrEMBL | UniProtAcc | Q9TYQ2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TYQ2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (85) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097525 | ||||||||
| 00097526 | |||||||||
| 00097527 | |||||||||
| 00097528 | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00013107 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016212 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016260 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022620 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021998 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022003 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable RNA endonuclease activity and mRNA binding activity. Predicted to be located in cytoplasmic ribonucleoprotein granule and nucleus. Is an ortholog of human KHNYN (KH and NYN domain containing); N4BP1 (NEDD4 binding protein 1); and NYNRIN (NYN domain and retroviral integrase containing). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y24D9B.1 | |||||||
| Corresponding_CDS_history | Y24D9B.1:wp82 | ||||||||
| Corresponding_transcript | Y24D9B.1.1 | ||||||||
| Other_sequence | FD515002.1 | ||||||||
| CSC00477_1 | |||||||||
| Dviv_isotig19967 | |||||||||
| Associated_feature | WBsf645915 | ||||||||
| WBsf996240 | |||||||||
| WBsf996241 | |||||||||
| WBsf996242 | |||||||||
| WBsf228185 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020131 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001383 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055721 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020889 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036732 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055723 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025129 | ||||||||
| Expr1039280 | |||||||||
| Expr1159245 | |||||||||
| Expr2007174 | |||||||||
| Expr2025407 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction | WBInteraction000232412 | ||||||||
| WBInteraction000234189 | |||||||||
| WBInteraction000455069 | |||||||||
| WBInteraction000543060 | |||||||||
| WBInteraction000548503 | |||||||||
| WBInteraction000551991 | |||||||||
| WBInteraction000576455 | |||||||||
| Map_info | Positive | Positive_clone | Y24D9B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 0.150436 | |||||||
| Method | Gene |
