WormBase Tree Display for Gene: WBGene00021196
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| WBGene00021196 | SMap | S_parent | Sequence | Y17G9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y17G9A.3 | |||||||
| Molecular_name | Y17G9A.3a | ||||||||
| Y17G9A.3a.1 | |||||||||
| CE24177 | |||||||||
| Y17G9A.3b | |||||||||
| CE53033 | |||||||||
| Y17G9A.3b.1 | |||||||||
| Other_name | CELE_Y17G9A.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y17G9A.3 | ||||||||
| DB_info | Database | AceView | gene | 4F622 | |||||
| WormQTL | gene | WBGene00021196 | |||||||
| WormFlux | gene | WBGene00021196 | |||||||
| NDB | locus_tag | CELE_Y17G9A.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021196|UniProtKB=Q9N485 | |||||||
| family | PTHR31464 | ||||||||
| NCBI | gene | 189460 | |||||||
| RefSeq | protein | NM_068256.2 | |||||||
| NM_001372811.2 | |||||||||
| TrEMBL | UniProtAcc | A0A486WWI2 | |||||||
| Q9N485 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9N485 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00012267 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012268 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013613 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018459 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018460 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021195 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022375 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00044363 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021197 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018461 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is affected by several genes including nhr-25; atfs-1; and dpy-21 based on tiling array; RNA-seq; and microarray studies. Is affected by multi-walled carbon nanotube based on RNA-seq studies. Is predicted to encode a protein with the following domain: Protein of unknown function DUF684. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y17G9A.3a | |||||||
| Y17G9A.3b | |||||||||
| Corresponding_transcript | Y17G9A.3a.1 | ||||||||
| Y17G9A.3b.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055591 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1027814 | ||||||||
| Expr1159097 | |||||||||
| Expr2007116 | |||||||||
| Expr2025344 | |||||||||
| Drives_construct | WBCnstr00024634 | ||||||||
| Construct_product | WBCnstr00024634 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (29) | |||||||||
| Map_info | Positive | Positive_clone | Y17G9A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 1.38254 | |||||||
| Method | Gene |
