WormBase Tree Display for Gene: WBGene00021125
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| WBGene00021125 | SMap | S_parent | Sequence | W10C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ccb-2 | Person_evidence | WBPerson1515 | |||||
| Sequence_name | W10C8.1 | ||||||||
| Molecular_name | W10C8.1a | ||||||||
| W10C8.1a.1 | |||||||||
| CE50039 | |||||||||
| W10C8.1b | |||||||||
| CE50011 | |||||||||
| W10C8.1b.1 | |||||||||
| W10C8.1c | |||||||||
| W10C8.1d | |||||||||
| Other_name | CELE_W10C8.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ccb-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Jan 2005 10:15:15 | WBPerson2970 | Name_change | CGC_name | ccb-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ccb | ||||||||
| Allele (76) | |||||||||
| Strain | WBStrain00031675 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000472 | ||||||||
| 00000473 | |||||||||
| 00000474 | |||||||||
| 00000475 | |||||||||
| 00000476 | |||||||||
| 00125569 | |||||||||
| 00125570 | |||||||||
| 00125571 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00000368 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | ccb-2 encodes a beta subunit of a voltage-gated calcium channel; a ccb-2::gfp promoter fusion is expressed in a few neurons in the head and in the ventral cord neurons. | Paper_evidence | WBPaper00040141 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 01 Sep 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable high voltage-gated calcium channel activity. Predicted to be involved in chemical synaptic transmission and neuromuscular junction development. Predicted to be located in synapse. Predicted to be part of voltage-gated calcium channel complex. Expressed in head neurons and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W10C8.1a | |||||||
| W10C8.1b | |||||||||
| Corresponding_CDS_history | W10C8.1:wp244 | ||||||||
| Corresponding_transcript | W10C8.1c | ||||||||
| W10C8.1d | |||||||||
| W10C8.1a.1 | |||||||||
| W10C8.1b.1 | |||||||||
| Other_sequence | DN152745.1 | ||||||||
| DN152701.1 | |||||||||
| Hbac_isotig04858 | |||||||||
| FG619582.1 | |||||||||
| HBC20569_1 | |||||||||
| Associated_feature | WBsf983000 | ||||||||
| WBsf983001 | |||||||||
| WBsf983002 | |||||||||
| WBsf1009417 | |||||||||
| WBsf1009418 | |||||||||
| WBsf1009419 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055079 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004462 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036426 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9664 | ||||||||
| Expr1011598 | |||||||||
| Expr1158614 | |||||||||
| Expr2009749 | |||||||||
| Expr2027989 | |||||||||
| Drives_construct | WBCnstr00014211 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction | WBInteraction000332828 | ||||||||
| WBInteraction000406787 | |||||||||
| WBInteraction000545996 | |||||||||
| WBInteraction000548965 | |||||||||
| Map_info | Map | I | Position | -5.3123 | Error | 0.002461 | |||
| Positive | Positive_clone | W10C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5051 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034076 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039366 | |||||||||
| WBPaper00040141 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
