WormBase Tree Display for Gene: WBGene00020895
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WBGene00020895 | SMap | S_parent | Sequence | T28D9 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | plpp | |||||
Allele (43) | ||||||
Strain | WBStrain00031488 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00005278 | |||||
00005279 | ||||||
00055921 | ||||||
00055922 | ||||||
00055923 | ||||||
00055924 | ||||||
00055925 | ||||||
00125415 | ||||||
Ortholog (32) | ||||||
Paralog | WBGene00008749 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00011524 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00018756 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Is an ortholog of human PLPP3 (phospholipid phosphatase 3). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | T28D9.3a | ||||
T28D9.3b | ||||||
T28D9.3d | ||||||
Corresponding_CDS_history | T28D9.3:wp127 | |||||
T28D9.3c:wp247 | ||||||
T28D9.3e:wp247 | ||||||
Corresponding_transcript | T28D9.3c | |||||
T28D9.3e | ||||||
T28D9.3a.1 | ||||||
T28D9.3b.1 | ||||||
T28D9.3b.2 | ||||||
T28D9.3d.1 | ||||||
T28D9.3d.2 | ||||||
Other_sequence | CRC12305_1 | |||||
Tcol_isotig14688 | ||||||
JI167794.1 | ||||||
CR04593 | ||||||
Tcir_isotig11281 | ||||||
Acan_isotig07031 | ||||||
FK804452.1 | ||||||
Oden_isotig20541 | ||||||
Dviv_isotig23813 | ||||||
Name_isotig01768 | ||||||
Associated_feature | WBsf644291 | |||||
WBsf644292 | ||||||
WBsf644293 | ||||||
WBsf221451 | ||||||
WBsf221452 | ||||||
Experimental_info | RNAi_result | WBRNAi00054418 | Inferred_automatically | RNAi_primary | ||
WBRNAi00070139 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00019401 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1027274 | |||||
Expr1039103 | ||||||
Expr1157962 | ||||||
Expr2006622 | ||||||
Expr2024839 | ||||||
Drives_construct | WBCnstr00024803 | |||||
Construct_product | WBCnstr00024803 | |||||
Microarray_results (35) | ||||||
Expression_cluster (148) | ||||||
Interaction (19) | ||||||
Map_info | Map | II | Position | -0.219459 | ||
Positive | Positive_clone | T28D9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00028527 | |||||
WBPaper00038491 | ||||||
WBPaper00042257 | ||||||
WBPaper00055090 | ||||||
WBPaper00065998 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |