WormBase Tree Display for Gene: WBGene00020615
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| WBGene00020615 | SMap | S_parent | Sequence | T20D4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | T20D4.9 | ||||||||
| Molecular_name | T20D4.9 | |||||||||
| Other_name | CELE_T20D4.9 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | T20D4.9 | |||||||||
| DB_info | Database | AceView | gene | 5D879 | ||||||
| WormQTL | gene | WBGene00020615 | ||||||||
| WormFlux | gene | WBGene00020615 | ||||||||
| NDB | locus_tag | CELE_T20D4.9 | ||||||||
| NCBI | gene | 188645 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 18 Feb 2016 15:27:39 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (73) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00084277 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00190748 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00216588 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Paralog | WBGene00008953 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00015882 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00015884 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00017281 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020614 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020879 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00021235 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020882 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Concise_description | T20D4.9 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; T20D4.9 has no clear orthologs in other organisms. | Paper_evidence | WBPaper00004584 | ||||||
| WBPaper00013276 | ||||||||||
| Curator_confirmed | WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Enriched in NSM and body wall muscle cell based on tiling array studies. Is affected by several genes including rrf-3; clk-1; and aak-2 based on microarray and RNA-seq studies. Is affected by six chemicals including Tunicamycin; Rifampin; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T20D4.9:wp210 | ||||||||
| T20D4.9:wp252 | ||||||||||
| Corresponding_pseudogene | T20D4.9 | |||||||||
| Associated_feature | WBsf999611 | |||||||||
| WBsf1019362 | ||||||||||
| Experimental_info | Expr_pattern | Expr1157194 | ||||||||
| Microarray_results | 172326_x_at | |||||||||
| 172355_x_at | ||||||||||
| A_12_P100301 | ||||||||||
| Aff_T20D4.9 | ||||||||||
| GPL19516_CGZ0035729 | ||||||||||
| GPL21109_T20D4.9 | ||||||||||
| GPL8304_CE_WBGene00020615_A | ||||||||||
| GPL8673_T20D4_9P00163 | ||||||||||
| GPL8673_T20D4_9P00959 | ||||||||||
| Expression_cluster (65) | ||||||||||
| Interaction | WBInteraction000118933 | |||||||||
| WBInteraction000143529 | ||||||||||
| WBInteraction000215317 | ||||||||||
| WBInteraction000225254 | ||||||||||
| WBInteraction000226644 | ||||||||||
| WBInteraction000261530 | ||||||||||
| WBInteraction000373918 | ||||||||||
| WBInteraction000388407 | ||||||||||
| WBInteraction000453689 | ||||||||||
| Map_info | Positive | Positive_clone | T20D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | -11.8088 | ||||||||
| Method | Gene |
