WormBase Tree Display for Gene: WBGene00020578
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WBGene00020578 | SMap | S_parent | Sequence | T19D12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | T19D12.3 | |||||
Molecular_name | T19D12.3 | ||||||
Other_name | CELE_T19D12.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | T19D12.3 | ||||||
DB_info | Database | AceView | gene | 2G951 | |||
WormQTL | gene | WBGene00020578 | |||||
WormFlux | gene | WBGene00020578 | |||||
NDB | locus_tag | CELE_T19D12.3 | |||||
NCBI | gene | 188607 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0000336 | |||||
Allele | WBVar01499702 | ||||||
WBVar01498435 | |||||||
WBVar00739479 | |||||||
WBVar00739480 | |||||||
WBVar00739481 | |||||||
WBVar00739482 | |||||||
WBVar00368640 | |||||||
WBVar00368641 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00086947 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||
WBGene00214436 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||
Paralog | WBGene00016004 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00019273 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00020576 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00020577 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Enriched in CEP socket cell; GABAergic neurons; excretory cell; and intestine based on tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by seventeen chemicals including methylmercuric chloride; Mercuric Chloride; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | T19D12.3:wp274 | |||||
Corresponding_pseudogene | T19D12.3 | ||||||
Associated_feature | WBsf221476 | ||||||
Experimental_info | Expr_pattern | Expr1022815 | |||||
Expr1157099 | |||||||
Expr2006259 | |||||||
Expr2024477 | |||||||
Drives_construct | WBCnstr00025036 | ||||||
Construct_product | WBCnstr00025036 | ||||||
Microarray_results (14) | |||||||
Expression_cluster (88) | |||||||
Interaction | WBInteraction000190684 | ||||||
WBInteraction000201863 | |||||||
WBInteraction000229089 | |||||||
WBInteraction000276851 | |||||||
WBInteraction000281918 | |||||||
WBInteraction000328600 | |||||||
WBInteraction000335858 | |||||||
WBInteraction000353261 | |||||||
WBInteraction000399967 | |||||||
WBInteraction000444853 | |||||||
Map_info | Positive | Positive_clone | T19D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | II | -0.0475057 | |||||
Method | Gene |