WormBase Tree Display for Gene: WBGene00020262
expand all nodes | collapse all nodes | view schema
| WBGene00020262 | SMap | S_parent | Sequence | CHROMOSOME_I | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | ferl-1 | Person_evidence | WBPerson680 | ||||||
| Sequence_name | T05E8.1 | |||||||||
| Molecular_name | T05E8.1 | |||||||||
| Other_name | CELE_T05E8.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | ferl-1 | |||||||||
| DB_info | Database | AceView | gene | 1G22 | ||||||
| WormQTL | gene | WBGene00020262 | ||||||||
| WormFlux | gene | WBGene00020262 | ||||||||
| NDB | locus_tag | CELE_T05E8.1 | ||||||||
| NCBI | gene | 188128 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 18 Jan 2008 09:30:29 | WBPerson2970 | Name_change | CGC_name | ferl-1 | |||||
| 3 | 21 Oct 2019 15:29:23 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | ferl | |||||||||
| Allele (72) | ||||||||||
| Strain | WBStrain00032496 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00035318 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00097344 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||||||
| Paralog | WBGene00001414 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in ABalapppaa and I5 neuron based on single-cell RNA-seq studies. Is affected by several genes including daf-2; age-1; and rrf-3 based on microarray and RNA-seq studies. Is affected by twelve chemicals including multi-walled carbon nanotube; metformin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T05E8.1:wp216 | ||||||||
| T05E8.1:wp230 | ||||||||||
| T05E8.1:wp274 | ||||||||||
| Corresponding_pseudogene | T05E8.1 | |||||||||
| Associated_feature | WBsf983701 | |||||||||
| WBsf983702 | ||||||||||
| WBsf983703 | ||||||||||
| WBsf983704 | ||||||||||
| WBsf983705 | ||||||||||
| WBsf1009828 | ||||||||||
| WBsf1009829 | ||||||||||
| WBsf1009830 | ||||||||||
| WBsf1009831 | ||||||||||
| WBsf1009832 | ||||||||||
| Experimental_info | Expr_pattern | Expr1012775 | ||||||||
| Expr1156155 | ||||||||||
| Expr2011753 | ||||||||||
| Expr2029991 | ||||||||||
| Drives_construct | WBCnstr00025257 | |||||||||
| Construct_product | WBCnstr00025257 | |||||||||
| Microarray_results (21) | ||||||||||
| Expression_cluster (72) | ||||||||||
| Interaction (37) | ||||||||||
| Map_info | Map | I | Position | 0.011204 | Error | 0.005271 | ||||
| Positive | Positive_clone | T05E8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00027653 | |||||||||
| WBPaper00038491 | ||||||||||
| WBPaper00055090 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
