WormBase Tree Display for Gene: WBGene00020167
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| WBGene00020167 | SMap | S_parent | Sequence | T02G5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | T02G5.11 | ||||||||
| Molecular_name | T02G5.11a | |||||||||
| T02G5.11b | ||||||||||
| Other_name | CELE_T02G5.11 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | T02G5.11 | |||||||||
| DB_info | Database | AceView | gene | 2H370 | ||||||
| WormQTL | gene | WBGene00020167 | ||||||||
| WormFlux | gene | WBGene00020167 | ||||||||
| NDB | locus_tag | CELE_T02G5.11 | ||||||||
| NCBI | gene | 187994 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 28 May 2013 16:19:21 | WBPerson615 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele | WBVar01499702 | |||||||||
| WBVar01496954 | ||||||||||
| WBVar01498435 | ||||||||||
| WBVar00369468 | ||||||||||
| WBVar00369469 | ||||||||||
| WBVar00315566 | ||||||||||
| WBVar01498701 | ||||||||||
| WBVar01538252 | ||||||||||
| WBVar00741975 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00042785 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| OMA | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00120354 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00195153 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Paralog | WBGene00003784 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Structured_description | Automated_description | Enriched in germ line and germline precursor cell based on RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including Heme; rotenone; and Zidovudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T02G5.11:wp127 | ||||||||
| T02G5.11:wp238 | ||||||||||
| Corresponding_pseudogene | T02G5.11a | |||||||||
| T02G5.11b | ||||||||||
| Associated_feature | WBsf988347 | |||||||||
| WBsf988348 | ||||||||||
| WBsf988349 | ||||||||||
| WBsf1012484 | ||||||||||
| WBsf223287 | ||||||||||
| Experimental_info | Expr_pattern | Expr1027878 | ||||||||
| Expr1038770 | ||||||||||
| Expr1155853 | ||||||||||
| Drives_construct | WBCnstr00025329 | |||||||||
| Construct_product | WBCnstr00025329 | |||||||||
| Microarray_results | SMD_T02G5.11 | |||||||||
| Aff_T02G5.11 | ||||||||||
| GPL8304_CE_WBGene00020167_A | ||||||||||
| Expression_cluster (101) | ||||||||||
| Interaction | WBInteraction000212766 | |||||||||
| WBInteraction000218657 | ||||||||||
| WBInteraction000277885 | ||||||||||
| WBInteraction000358129 | ||||||||||
| WBInteraction000375802 | ||||||||||
| WBInteraction000500402 | ||||||||||
| WBInteraction000550558 | ||||||||||
| Map_info | Positive | Positive_clone | T02G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | 0.493224 | ||||||||
| Reference | WBPaper00036884 | |||||||||
| Method | Gene |
